Cow genome map

Conread name: Emb1-C0005217_F24

Conread position: 3-298
Cow position: chr28:13462925-13463217 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 36

Conread position: 3-524
Cow position: chr28:12650191-12650726 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 96

Conread position: 9-297
Cow position: chr28:23310369-23310083 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 89

Conread position: 12-523
Cow position: chr28:957847-958366 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 5

Conread position: 13-298
Cow position: chr28:7744074-7744351 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 150, 86

Conread position: 14-278
Cow position: chr28:34730705-34730960 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 34

Conread position: 14-295
Cow position: chr28:25595875-25596154 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 84

Conread position: 14-297
Cow position: chr28:482736-482455 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position: chr28:980292-980011 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 209, 86

Conread position: 14-298
Cow position: chr28:1197085-1197382 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 14-298
Cow position: chr28:1214858-1214576 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 82

Conread position: 14-298
Cow position: chr28:1507848-1508130 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:3626987-3627267 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 140, 62

Conread position: 14-298
Cow position: chr28:5111750-5111467 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 108, 85

Conread position: 14-298
Cow position: chr28:5211094-5211376 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:6472465-6472185 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 138, 81

Conread position: 14-298
Cow position: chr28:7004998-7005281 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 35, 86

Conread position: 14-298
Cow position: chr28:7907573-7907292 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position: chr28:10772057-10772337 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 57

Conread position: 14-298
Cow position: chr28:12217317-12217035 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:14666119-14666399 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 69

Conread position: 14-298
Cow position: chr28:20935441-20935158 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 82

Conread position: 14-298
Cow position: chr28:22255226-22254944 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:29036680-29036398 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:29823158-29823440 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:30097850-30098132 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr28:34582896-34583178 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr28:444380-444663 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr28:1956343-1956624 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 140, 39

Conread position: 14-299
Cow position: chr28:2644687-2644970 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr28:4929478-4929195 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr28:5311946-5312229 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr28:5637023-5637305 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr28:6478191-6478474 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr28:6777031-6776748 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 86

Conread position: 14-299
Cow position: chr28:7059202-7059485 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr28:7335955-7336238 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr28:7443497-7443214 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr28:7829479-7829761 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr28:9181842-9182124 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 34

Conread position: 14-299
Cow position: chr28:20410714-20410998 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 139, 84

Conread position: 14-299
Cow position: chr28:20967697-20967414 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr28:21568875-21569148 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr28:24885833-24886115 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 140, 34

Conread position: 14-299
Cow position: chr28:25849533-25849816 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr28:32731040-32730758 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 206, 84

Conread position: 14-299
Cow position: chr28:34678221-34677942 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 122, 39

Conread position: 14-503
Cow position: chr28:10279826-10280328 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 14-524
Cow position: chr28:17369061-17369562 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 348
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 209, 85

Conread position: 14-524
Cow position: chr28:21768321-21767795 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 100

Conread position: 15-299
Cow position: chr28:16181341-16181623 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 139, 96

Conread position: 16-280
Cow position: chr28:31848955-31848698 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 81

Conread position: 16-298
Cow position: chr28:8717979-8717699 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 143, 82

Conread position: 16-299
Cow position: chr28:10162220-10162485 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 45

Conread position: 18-280
Cow position: chr28:3652223-3652474 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 204, 49

Conread position: 18-294
Cow position: chr28:17663973-17663706 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 81

Conread position: 18-298
Cow position: chr28:5940462-5940740 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 81

Conread position: 18-298
Cow position: chr28:17391409-17391687 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 81

Conread position: 18-298
Cow position: chr28:34597220-34597498 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 96

Conread position: 18-299
Cow position: chr28:21896258-21896537 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 81

Conread position: 18-524
Cow position: chr28:1811983-1811475 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 343
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 136, 81

Conread position: 19-299
Cow position: chr28:10302815-10303093 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 135, 80

Conread position: 20-524
Cow position: chr28:5816615-5817130 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 59

Conread position: 22-299
Cow position: chr28:11502236-11501967 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 132, 77

Conread position: 26-299
Cow position: chr28:9288409-9288138 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 72

Conread position: 35-524
Cow position: chr28:17031097-17030589 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 56

Conread position: 38-299
Cow position: chr28:10194609-10194350 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 61

Conread position: 39-299
Cow position: chr28:13323130-13323388 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 75

Conread position: 42-299
Cow position: chr28:5791508-5791256 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 41

Conread position: 54-523
Cow position: chr28:18145689-18145224 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 312
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 98, 52

Conread position: 105-298
Cow position: chr28:23839073-23839274 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 188

Conread position: 127-299
Cow position: chr28:331825-331645 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 131-299
Cow position: chr28:6319874-6320049 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 40

Conread position: 301-523
Cow position: chr28:16212052-16211827 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 66

Conread position: 301-524
Cow position: chr28:7784945-7784714 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 152

Conread position: 301-524
Cow position: chr28:16597427-16597656 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 180

Conread position: 302-523
Cow position: chr28:17602764-17602533 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 183

Conread position: 308-523
Cow position: chr28:3188732-3188509 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 175

Conread position: 313-522
Cow position: chr28:22201248-22201455 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 183, 66

Conread position: 329-522
Cow position: chr28:25726437-25726633 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 18

Conread position: 337-523
Cow position: chr28:14740738-14740915 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 153, 25

Conread position: 337-524
Cow position: chr28:25826801-25826603 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 338-520
Cow position: chr28:7744416-7744603 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 142

Conread position: 338-522
Cow position: chr28:7005346-7005535 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 338-522
Cow position: chr28:32786108-32785927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 138

Conread position: 338-523
Cow position: chr28:26419682-26419493 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr28:5211441-5211630 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 155, 140

Conread position: 338-524
Cow position: chr28:5748387-5748197 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 338-524
Cow position: chr28:10578779-10578587 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 143

Conread position: 338-524
Cow position: chr28:17391752-17391942 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 141

Conread position: 338-525
Cow position: chr28:28471343-28471529 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 93

Conread position: 339-524
Cow position: chr28:17663629-17663440 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 140

Conread position: 339-524
Cow position: chr28:29036332-29036143 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 140

Conread position: 348-524
Cow position: chr28:12156008-12156188 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 99

Conread position: 351-524
Cow position: chr28:10473290-10473467 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 128

Conread position: 352-524
Cow position: chr28:34597577-34597754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 359-524
Cow position: chr28:13864889-13865060 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 122

Conread position: 361-524
Cow position: chr28:10772419-10772585 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 117

Conread position: 368-523
Cow position: chr28:29198826-29198985 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 111

Conread position: 381-524
Cow position: chr28:24644823-24644969 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 112, 97

Conread position: 389-525
Cow position: chr28:25248490-25248629 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 89

Show alignments to all cow chromosomes.