Cow genome map


           Conread name:
           Emb1-C0005217_F24
        

               Conread position:
               3-288
               

               Cow position:
               chr3:24586383-24586107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               149, 53
               

               Conread position:
               3-298
               

               Cow position:
               chr3:31121297-31120998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 97
               

               Conread position:
               3-298
               

               Cow position:
               chr3:72632916-72633212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               3-299
               

               Cow position:
               chr3:37627741-37628031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               3-299
               

               Cow position:
               chr3:64653515-64653808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 96
               

               Conread position:
               3-524
               

               Cow position:
               chr3:30616091-30615547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               9-298
               

               Cow position:
               chr3:21179407-21179120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               145, 104
               

               Conread position:
               13-298
               

               Cow position:
               chr3:58950318-58950600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               13-298
               

               Cow position:
               chr3:74850289-74850008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               13-299
               

               Cow position:
               chr3:48361797-48362077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               208, 65
               

               Conread position:
               14-249
               

               Cow position:
               chr3:10370858-10371078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               201, 66
               

               Conread position:
               14-257
               

               Cow position:
               chr3:46505625-46505860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               149, 84
               

               Conread position:
               14-257
               

               Cow position:
               chr3:50941430-50941665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-281
               

               Cow position:
               chr3:41207740-41207475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-281
               

               Cow position:
               chr3:70323177-70322916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               14-295
               

               Cow position:
               chr3:5497575-5497304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 81
               

               Conread position:
               14-297
               

               Cow position:
               chr3:18862298-18862578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:522978-523247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 42
               

               Conread position:
               14-298
               

               Cow position:
               chr3:1740016-1739734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:2572384-2572666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:2790608-2790890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:2834682-2834400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:13276424-13276143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               140, 60
               

               Conread position:
               14-298
               

               Cow position:
               chr3:15416323-15416605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:18814363-18814645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:20795150-20795432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:36875210-36874922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 125
               

               Conread position:
               14-298
               

               Cow position:
               chr3:42846210-42846483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               208, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:52150429-52150147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:58034780-58034498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-298
               

               Cow position:
               chr3:73636738-73637019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:75038985-75038703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-298
               

               Cow position:
               chr3:81100937-81101217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               206, 81
               

               Conread position:
               14-299
               

               Cow position:
               chr3:823234-822950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:2866798-2866515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:5474395-5474679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 99
               

               Conread position:
               14-299
               

               Cow position:
               chr3:6528849-6529132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:6713864-6714147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:7155950-7155667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:13723856-13723572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:19880908-19881189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 42
               

               Conread position:
               14-299
               

               Cow position:
               chr3:20379860-20379577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:21303692-21303423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               14-299
               

               Cow position:
               chr3:26743012-26742733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               140, 32
               

               Conread position:
               14-299
               

               Cow position:
               chr3:26992983-26993266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:28435842-28435559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               103, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:29574269-29573986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:32490856-32490573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:32620184-32619902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:35342507-35342790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:37280252-37280535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:37893690-37893971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:40048746-40049029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:42747865-42747582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               14-299
               

               Cow position:
               chr3:42977727-42977450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:43084099-43084383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:43525882-43525599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:47078757-47078473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:49563867-49564156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:49611351-49611068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               139, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:49998995-49999276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               140, 61
               

               Conread position:
               14-299
               

               Cow position:
               chr3:50204403-50204705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               14-299
               

               Cow position:
               chr3:53880410-53880127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:56297241-56297524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:56485403-56485120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:68510479-68510196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               140, 82
               

               Conread position:
               14-299
               

               Cow position:
               chr3:68697108-68696825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-299
               

               Cow position:
               chr3:68717852-68717570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               14-299
               

               Cow position:
               chr3:68870893-68870610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-299
               

               Cow position:
               chr3:74060331-74060609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               140, 38
               

               Conread position:
               14-299
               

               Cow position:
               chr3:76864288-76864571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               14-461
               

               Cow position:
               chr3:19947079-19947532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 85
               

               Conread position:
               14-523
               

               Cow position:
               chr3:20781569-20781067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               14-523
               

               Cow position:
               chr3:49542344-49541815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-524
               

               Cow position:
               chr3:23010229-23010749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-524
               

               Cow position:
               chr3:40101991-40101465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 78
               

               Conread position:
               14-525
               

               Cow position:
               chr3:12798194-12797667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-525
               

               Cow position:
               chr3:19883327-19883853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               14-525
               

               Cow position:
               chr3:34504266-34503741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               14-525
               

               Cow position:
               chr3:83767110-83767640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 84
               

               Conread position:
               15-297
               

               Cow position:
               chr3:65988781-65989058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 45
               

               Conread position:
               15-298
               

               Cow position:
               chr3:16294052-16293770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               139, 81
               

               Conread position:
               15-299
               

               Cow position:
               chr3:19798294-19798012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               15-299
               

               Cow position:
               chr3:40337285-40337006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 83
               

               Conread position:
               15-299
               

               Cow position:
               chr3:48845864-48846145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               139, 84
               

               Conread position:
               16-299
               

               Cow position:
               chr3:74848306-74848031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 82
               

               Conread position:
               16-523
               

               Cow position:
               chr3:17938143-17937625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 82
               

               Conread position:
               16-523
               

               Cow position:
               chr3:23170334-23169833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 82
               

               Conread position:
               16-524
               

               Cow position:
               chr3:15663578-15663055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 76
               

               Conread position:
               18-294
               

               Cow position:
               chr3:16225738-16226004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               136, 96
               

               Conread position:
               18-298
               

               Cow position:
               chr3:49134676-49134398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               136, 81
               

               Conread position:
               18-299
               

               Cow position:
               chr3:1033723-1034002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               136, 96
               

               Conread position:
               18-299
               

               Cow position:
               chr3:65177871-65178149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               136, 80
               

               Conread position:
               19-299
               

               Cow position:
               chr3:2921123-2921397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 50
               

               Conread position:
               19-299
               

               Cow position:
               chr3:7246242-7245964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               135, 80
               

               Conread position:
               29-294
               

               Cow position:
               chr3:57455836-57456093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               125, 7
               

               Conread position:
               29-299
               

               Cow position:
               chr3:70914393-70914123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               33-524
               

               Cow position:
               chr3:67545718-67545246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               35-299
               

               Cow position:
               chr3:40521062-40520800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               118, 64
               

               Conread position:
               36-298
               

               Cow position:
               chr3:30938379-30938635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               36-299
               

               Cow position:
               chr3:52664279-52664537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               120, 62
               

               Conread position:
               39-299
               

               Cow position:
               chr3:32412610-32412346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               39-524
               

               Cow position:
               chr3:24455634-24455144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               42-295
               

               Cow position:
               chr3:56102633-56102876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               178, 56
               

               Conread position:
               43-298
               

               Cow position:
               chr3:54654291-54654036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 72
               

               Conread position:
               51-299
               

               Cow position:
               chr3:11417440-11417686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               53-298
               

               Cow position:
               chr3:39856359-39856602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               59-299
               

               Cow position:
               chr3:72175401-72175166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               164, 40
               

               Conread position:
               63-299
               

               Cow position:
               chr3:78519953-78520187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               88-295
               

               Cow position:
               chr3:39327468-39327684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               88-299
               

               Cow position:
               chr3:49732871-49732656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               98-299
               

               Cow position:
               chr3:2074717-2074922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               101-281
               

               Cow position:
               chr3:44537206-44537021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               107-298
               

               Cow position:
               chr3:41019374-41019175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               107-299
               

               Cow position:
               chr3:6896768-6896967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 65
               

               Conread position:
               107-299
               

               Cow position:
               chr3:26566716-26566914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               107-299
               

               Cow position:
               chr3:37021468-37021271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               107-491
               

               Cow position:
               chr3:38862675-38863076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               108-298
               

               Cow position:
               chr3:4039990-4039793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 51
               

               Conread position:
               108-299
               

               Cow position:
               chr3:20475454-20475654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               108-299
               

               Cow position:
               chr3:68273781-68273980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               108-524
               

               Cow position:
               chr3:2365956-2365516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 307
               

               Conread position:
               108-525
               

               Cow position:
               chr3:302172-302616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               110-298
               

               Cow position:
               chr3:11384260-11384457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               117-297
               

               Cow position:
               chr3:25056639-25056831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               117-441
               

               Cow position:
               chr3:7773050-7772708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               36, 337
               

               Conread position:
               118-296
               

               Cow position:
               chr3:31396325-31396510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 111
               

               Conread position:
               124-299
               

               Cow position:
               chr3:35918521-35918704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               124-299
               

               Cow position:
               chr3:36121132-36121315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               124-524
               

               Cow position:
               chr3:21081870-21082259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               131-298
               

               Cow position:
               chr3:14212354-14212529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               131-299
               

               Cow position:
               chr3:24315937-24316113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               169-524
               

               Cow position:
               chr3:37983362-37982972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               301-524
               

               Cow position:
               chr3:34557208-34556984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               301-524
               

               Cow position:
               chr3:64282154-64281927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               301-524
               

               Cow position:
               chr3:65473591-65473820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               304-523
               

               Cow position:
               chr3:66977830-66978052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 139
               

               Conread position:
               319-524
               

               Cow position:
               chr3:54863435-54863228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               57, 101
               

               Conread position:
               329-524
               

               Cow position:
               chr3:46349422-46349618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               161, 44
               

               Conread position:
               337-524
               

               Cow position:
               chr3:2507438-2507248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               337-524
               

               Cow position:
               chr3:4039728-4039536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               337-524
               

               Cow position:
               chr3:13291308-13291498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               338-522
               

               Cow position:
               chr3:33269430-33269615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               338-522
               

               Cow position:
               chr3:81101282-81101470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:5887089-5887277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               338-524
               

               Cow position:
               chr3:6864862-6865052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:13276078-13275884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               338-524
               

               Cow position:
               chr3:23287133-23286943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:35619756-35619946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               338-524
               

               Cow position:
               chr3:38869770-38869960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               338-524
               

               Cow position:
               chr3:43190066-43189879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               338-524
               

               Cow position:
               chr3:46505972-46506162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:54653971-54653781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:59864683-59864873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:64653872-64654062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-524
               

               Cow position:
               chr3:73451110-73450920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               338-525
               

               Cow position:
               chr3:64655414-64655599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               338-525
               

               Cow position:
               chr3:72175102-72174911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               340-524
               

               Cow position:
               chr3:7476715-7476526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               344-524
               

               Cow position:
               chr3:21100015-21100197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               149, 29
               

               Conread position:
               351-524
               

               Cow position:
               chr3:12667913-12668094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               353-524
               

               Cow position:
               chr3:19794873-19794698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 126
               

               Conread position:
               357-524
               

               Cow position:
               chr3:11411826-11411655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               373-524
               

               Cow position:
               chr3:81375012-81374858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               120, 105
               
Show alignments to all cow chromosomes.