Cow genome map
| Conread name: | Emb1-C0005217_F24 |
| Conread position: | 3-298 |
| Cow position: | chr5:2699422-2699129 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 5-298 |
| Cow position: | chr5:52830027-52829740 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 5-491 |
| Cow position: | chr5:29458677-29459154 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 10 |
| Conread position: | 14-245 |
| Cow position: | chr5:48409698-48409475 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 14-246 |
| Cow position: | chr5:12679818-12679597 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 65 |
| Conread position: | 14-253 |
| Cow position: | chr5:32965300-32965076 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 14-257 |
| Cow position: | chr5:44709617-44709385 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 140, 55 |
| Conread position: | 14-262 |
| Cow position: | chr5:24219907-24220146 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-290 |
| Cow position: | chr5:57336651-57336383 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-294 |
| Cow position: | chr5:6615530-6615260 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-295 |
| Cow position: | chr5:37610179-37609901 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 14-296 |
| Cow position: | chr5:37735137-37735418 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 14-297 |
| Cow position: | chr5:7396012-7396291 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 14-297 |
| Cow position: | chr5:41952312-41952035 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-298 |
| Cow position: | chr5:295027-295309 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr5:1339160-1338877 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 86 |
| Conread position: | 14-298 |
| Cow position: | chr5:2917226-2917506 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr5:3788990-3789272 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 14-298 |
| Cow position: | chr5:7276596-7276876 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 140, 86 |
| Conread position: | 14-298 |
| Cow position: | chr5:12921161-12921442 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 14-298 |
| Cow position: | chr5:14636816-14636534 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 14-298 |
| Cow position: | chr5:24298776-24299057 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 14-298 |
| Cow position: | chr5:32755681-32755400 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 14-298 |
| Cow position: | chr5:46666836-46667118 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr5:49221730-49221449 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 14-298 |
| Cow position: | chr5:51745985-51746268 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr5:58771107-58770826 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 141, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:443547-443264 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:4434742-4434459 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:6125400-6125117 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:6455901-6455618 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:6986723-6986440 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:10299230-10299513 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr5:11357888-11358171 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:11632223-11631940 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:14543538-14543256 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:18119213-18118930 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:18667070-18667352 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 81 |
| Conread position: | 14-299 |
| Cow position: | chr5:23957564-23957281 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:24633277-24632994 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr5:26466408-26466684 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 207, 71 |
| Conread position: | 14-299 |
| Cow position: | chr5:29634191-29634474 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr5:30157122-30157405 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:30294081-30294353 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:30844591-30844871 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:31709062-31709345 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:37625623-37625904 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:38662094-38662377 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:40791603-40791881 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 206, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:45180326-45180042 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:46817340-46817057 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr5:47697432-47697161 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 14-299 |
| Cow position: | chr5:48026032-48026314 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:50675825-50675542 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr5:51166545-51166264 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 14-299 |
| Cow position: | chr5:52823444-52823162 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:54928157-54927874 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:54930485-54930202 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:57984079-57983798 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 14-299 |
| Cow position: | chr5:58191679-58191963 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr5:59064207-59064489 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 85 |
| Conread position: | 14-299 |
| Cow position: | chr5:62160156-62159880 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 14-522 |
| Cow position: | chr5:69519367-69519897 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 69 |
| Conread position: | 14-523 |
| Cow position: | chr5:13258364-13258884 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 14-523 |
| Cow position: | chr5:33776005-33775489 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 84 |
| Conread position: | 14-523 |
| Cow position: | chr5:34670321-34669791 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 17 |
| Conread position: | 14-524 |
| Cow position: | chr5:18901097-18901618 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr5:41066787-41067309 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr5:49521472-49522002 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 14-524 |
| Cow position: | chr5:49565340-49565863 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr5:64845499-64844969 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 15-299 |
| Cow position: | chr5:14631499-14631220 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 15-525 |
| Cow position: | chr5:14905288-14904779 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 83 |
| Conread position: | 16-295 |
| Cow position: | chr5:53834418-53834693 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 82 |
| Conread position: | 17-299 |
| Cow position: | chr5:71737880-71738159 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 18-295 |
| Cow position: | chr5:31120440-31120165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 135, 81 |
| Conread position: | 18-298 |
| Cow position: | chr5:24101416-24101694 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 136, 96 |
| Conread position: | 18-298 |
| Cow position: | chr5:47560795-47560517 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 136, 81 |
| Conread position: | 20-299 |
| Cow position: | chr5:59146145-59146422 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 134, 79 |
| Conread position: | 21-296 |
| Cow position: | chr5:15723555-15723289 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 133, 77 |
| Conread position: | 26-298 |
| Cow position: | chr5:21188995-21189265 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 26-299 |
| Cow position: | chr5:54136864-54136593 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 26-484 |
| Cow position: | chr5:39935863-39936317 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 50 |
| Conread position: | 31-298 |
| Cow position: | chr5:34526177-34526442 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 39-291 |
| Cow position: | chr5:25232360-25232112 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 39-524 |
| Cow position: | chr5:34299677-34300180 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 41-288 |
| Cow position: | chr5:34558933-34559171 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 179, 55 |
| Conread position: | 48-298 |
| Cow position: | chr5:3544104-3544352 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 56-297 |
| Cow position: | chr5:24577240-24577479 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 56-297 |
| Cow position: | chr5:28571352-28571591 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 56-299 |
| Cow position: | chr5:1059763-1059522 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 83-298 |
| Cow position: | chr5:55630882-55631108 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 88-299 |
| Cow position: | chr5:13630670-13630449 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 89-299 |
| Cow position: | chr5:20108202-20107982 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 90-299 |
| Cow position: | chr5:6572413-6572198 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 100-298 |
| Cow position: | chr5:36370158-36369948 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 101-524 |
| Cow position: | chr5:42743647-42744089 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 107-295 |
| Cow position: | chr5:21827672-21827861 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 107-299 |
| Cow position: | chr5:39216392-39216192 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 107-299 |
| Cow position: | chr5:62377220-62377411 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 107-523 |
| Cow position: | chr5:18491251-18491706 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 405 |
| Conread position: | 108-298 |
| Cow position: | chr5:71457199-71457002 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 108-299 |
| Cow position: | chr5:2695956-2695757 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 108-299 |
| Cow position: | chr5:34683514-34683315 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 108-417 |
| Cow position: | chr5:69770927-69771252 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 109-299 |
| Cow position: | chr5:52646705-52646509 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 109-524 |
| Cow position: | chr5:41333460-41333887 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 110-295 |
| Cow position: | chr5:54952274-54952081 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 110-299 |
| Cow position: | chr5:41488518-41488715 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 124-299 |
| Cow position: | chr5:10772963-10772781 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 135-524 |
| Cow position: | chr5:47854708-47855126 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 153-523 |
| Cow position: | chr5:27549598-27549216 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 166-521 |
| Cow position: | chr5:42676166-42676539 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 223 |
| Conread position: | 301-524 |
| Cow position: | chr5:43991349-43991581 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 183 |
| Conread position: | 304-523 |
| Cow position: | chr5:29558667-29558891 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 305-524 |
| Cow position: | chr5:31634509-31634735 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 333-523 |
| Cow position: | chr5:15856121-15855934 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 163, 42 |
| Conread position: | 333-523 |
| Cow position: | chr5:34524133-34523946 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 335-524 |
| Cow position: | chr5:40828273-40828081 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 337-524 |
| Cow position: | chr5:21189329-21189517 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 338-524 |
| Cow position: | chr5:1338812-1338622 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr5:2917571-2917760 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 338-524 |
| Cow position: | chr5:3501019-3500829 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr5:6151723-6151533 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 338-524 |
| Cow position: | chr5:7042351-7042540 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 338-524 |
| Cow position: | chr5:14636469-14636280 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 155, 140 |
| Conread position: | 338-524 |
| Cow position: | chr5:24101759-24101949 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr5:24299122-24299312 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 338-524 |
| Cow position: | chr5:29742452-29742262 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr5:43984193-43984383 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr5:54337011-54337201 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 339-524 |
| Cow position: | chr5:55631174-55631363 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 339-524 |
| Cow position: | chr5:73485776-73485587 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 352-525 |
| Cow position: | chr5:20107904-20107730 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 352-525 |
| Cow position: | chr5:54927796-54927622 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 352-525 |
| Cow position: | chr5:54930124-54929950 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 354-524 |
| Cow position: | chr5:34527692-34527865 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 365-524 |
| Cow position: | chr5:68593559-68593719 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 373-524 |
| Cow position: | chr5:14313415-14313569 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 105 |
Show alignments to all cow chromosomes.