Cow genome map

Conread name: Emb1-C0005217_F24

Conread position: 3-297
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 148, 95

Conread position: 3-299
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 148, 95

Conread position: 3-299
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 66

Conread position: 14-270
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 83

Conread position: 14-281
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 100

Conread position: 14-294
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-294
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-294
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 84

Conread position: 14-294
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 84

Conread position: 14-297
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 84

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 25

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 20

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 140, 57

Conread position: 14-298
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 208, 25

Conread position: 14-298
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 25

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 145, 83

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 149, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 57

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 84

Conread position: 14-298
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 104, 85

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 84

Conread position: 14-298
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 81

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 140, 99

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 86

Conread position: 14-298
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 61

Conread position: 14-298
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 57

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 138, 85

Conread position: 14-299
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 18

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 139, 86

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 145, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 289

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 140, 54

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 25

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-524
Cow position:
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 14-524
Cow position:
Alignm length: 539
Alignm identity: 350
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 98

Conread position: 14-524
Cow position:
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 54

Conread position: 14-525
Cow position:
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 15-298
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 139, 84

Conread position: 15-299
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 139, 99

Conread position: 15-299
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 139, 83

Conread position: 18-298
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 42

Conread position: 18-298
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 30

Conread position: 18-298
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 136, 81

Conread position: 18-299
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 96

Conread position: 18-524
Cow position:
Alignm length: 539
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 29

Conread position: 19-524
Cow position:
Alignm length: 540
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 79

Conread position: 26-298
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 128, 6

Conread position: 26-299
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 88

Conread position: 31-299
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 123, 77

Conread position: 32-299
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 40

Conread position: 40-299
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 59

Conread position: 40-299
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 9, 59

Conread position: 44-518
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 51

Conread position: 45-524
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 70

Conread position: 48-524
Cow position:
Alignm length: 506
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 31

Conread position: 53-299
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 46

Conread position: 54-299
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 60

Conread position: 54-299
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 60

Conread position: 57-299
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 41

Conread position: 88-299
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 93-299
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 103-299
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 28

Conread position: 106-299
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 107-295
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 114, 44

Conread position: 107-299
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 108-298
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 181

Conread position: 108-299
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 108-299
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 110-514
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 53

Conread position: 117-293
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 117-298
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 124-299
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 124-299
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 124-299
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 58

Conread position: 124-299
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 124-525
Cow position:
Alignm length: 426
Alignm identity: 273
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 92

Conread position: 138-299
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 142-298
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 10

Conread position: 142-299
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 190-299
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 232-429
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 172

Conread position: 301-524
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 112

Conread position: 301-524
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 182

Conread position: 338-524
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 77

Conread position: 338-524
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 109

Conread position: 338-524
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 100

Conread position: 338-524
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 338-524
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 142

Conread position: 338-525
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 339-524
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 45

Conread position: 347-523
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 135

Conread position: 348-524
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 100

Conread position: 352-525
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 112

Conread position: 352-525
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 113

Conread position: 360-524
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 33

Conread position: 373-524
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 106

Show alignments to all cow chromosomes.