Cow genome map

Conread name: Emb1-C0005217_H15

Conread position: 8-608
Cow position: chr1:67286846-67287452 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 26

Conread position: 10-173
Cow position: chr1:55322715-55322550 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 24

Conread position: 16-292
Cow position: chr1:94253267-94253549 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 86, 18

Conread position: 16-578
Cow position: chr1:40513033-40512442 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 8

Conread position: 17-459
Cow position: chr1:21720237-21720693 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 39-157
Cow position: chr1:38387341-38387226 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 56-356
Cow position: chr1:30027073-30026773 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 19

Conread position: 64-344
Cow position: chr1:34690081-34690377 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 177

Conread position: 98-310
Cow position: chr1:31418436-31418216 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 156-476
Cow position: chr1:5319319-5319640 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 72

Conread position: 156-575
Cow position: chr1:88270048-88269617 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 75

Conread position: 164-378
Cow position: chr1:29413971-29413747 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 64

Conread position: 169-552
Cow position: chr1:22344110-22344485 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 51

Conread position: 178-429
Cow position: chr1:38387158-38386900 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 12

Conread position: 181-603
Cow position: chr1:59647464-59647907 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 68

Conread position: 183-388
Cow position: chr1:58179506-58179293 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 28

Conread position: 203-608
Cow position: chr1:55321935-55321516 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 225-433
Cow position: chr1:86610071-86610289 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 17

Conread position: 285-595
Cow position: chr1:33551226-33551541 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 287-608
Cow position: chr1:102549538-102549859 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 291-507
Cow position: chr1:33712371-33712596 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 22

Conread position: 291-585
Cow position: chr1:97226404-97226104 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 305-593
Cow position: chr1:82923860-82923565 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 191

Conread position: 305-596
Cow position: chr1:48246164-48246449 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 305-607
Cow position: chr1:8825369-8825679 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 305-607
Cow position: chr1:69922119-69921811 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 282

Conread position: 306-608
Cow position: chr1:17012425-17012114 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 276

Conread position: 307-592
Cow position: chr1:21087728-21088022 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 280

Conread position: 307-592
Cow position: chr1:85792001-85792290 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 307-608
Cow position: chr1:82652968-82653290 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 292

Conread position: 317-518
Cow position: chr1:30283218-30283008 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 179

Conread position: 319-607
Cow position: chr1:52358944-52358648 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 267

Show alignments to all cow chromosomes.