Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 8-157 |
| Cow position: | chr11:8283077-8283222 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 8-608 |
| Cow position: | chr11:10090344-10090968 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 9-171 |
| Cow position: | chr11:30125032-30124877 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 9-253 |
| Cow position: | chr11:7316873-7317128 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 11-350 |
| Cow position: | chr11:7113890-7114229 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 71-435 |
| Cow position: | chr11:39802176-39802563 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 125-607 |
| Cow position: | chr11:28049413-28048919 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 132-608 |
| Cow position: | chr11:32271493-32271026 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 141-437 |
| Cow position: | chr11:8261735-8261425 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 159-443 |
| Cow position: | chr11:9220129-9219839 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 161-585 |
| Cow position: | chr11:28063670-28064097 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 67 |
| Conread position: | 164-552 |
| Cow position: | chr11:8283291-8283694 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 175-432 |
| Cow position: | chr11:30124577-30124301 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 177-585 |
| Cow position: | chr11:52886199-52885797 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 230-436 |
| Cow position: | chr11:44495552-44495328 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 234-600 |
| Cow position: | chr11:66727274-66727655 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 288 |
| Conread position: | 255-585 |
| Cow position: | chr11:62229130-62229456 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 265-432 |
| Cow position: | chr11:30125313-30125127 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 284-442 |
| Cow position: | chr11:256224-256059 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 285-601 |
| Cow position: | chr11:44157289-44156967 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 291-454 |
| Cow position: | chr11:54209581-54209751 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 291-592 |
| Cow position: | chr11:12093527-12093831 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 291-603 |
| Cow position: | chr11:9157185-9156872 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 291-608 |
| Cow position: | chr11:22934770-22935082 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 304-608 |
| Cow position: | chr11:46246582-46246263 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 305-585 |
| Cow position: | chr11:76374224-76373948 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 305-607 |
| Cow position: | chr11:4027582-4027275 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 306-575 |
| Cow position: | chr11:84389609-84389887 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 234 |
| Conread position: | 307-592 |
| Cow position: | chr11:15983600-15983895 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 281 |
| Conread position: | 318-607 |
| Cow position: | chr11:8245302-8245600 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 269 |
Show alignments to all cow chromosomes.