Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 9-142 |
| Cow position: | chr15:32679627-32679498 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 9-351 |
| Cow position: | chr15:369743-369383 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 10-350 |
| Cow position: | chr15:35648293-35647937 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 24 |
| Conread position: | 10-497 |
| Cow position: | chr15:36642559-36643059 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 47-217 |
| Cow position: | chr15:51672798-51672967 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 47-608 |
| Cow position: | chr15:24794013-24794583 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 71-527 |
| Cow position: | chr15:12615162-12615619 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 93-350 |
| Cow position: | chr15:23264775-23265039 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 98-592 |
| Cow position: | chr15:686646-687148 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 61 |
| Conread position: | 159-608 |
| Cow position: | chr15:35735329-35735806 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 241 |
| Conread position: | 167-608 |
| Cow position: | chr15:16507770-16508222 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 171-608 |
| Cow position: | chr15:21449490-21449919 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 180-516 |
| Cow position: | chr15:1664286-1664619 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 182-608 |
| Cow position: | chr15:7984227-7983791 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 232 |
| Conread position: | 189-608 |
| Cow position: | chr15:40105674-40106094 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 206-608 |
| Cow position: | chr15:1237509-1237912 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 219-592 |
| Cow position: | chr15:51714788-51715178 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 265-603 |
| Cow position: | chr15:35753709-35753362 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 280-607 |
| Cow position: | chr15:4961539-4961875 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 284-575 |
| Cow position: | chr15:6593038-6592753 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 284-608 |
| Cow position: | chr15:7260532-7260856 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 285-595 |
| Cow position: | chr15:18332921-18332607 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 6 |
| Conread position: | 285-607 |
| Cow position: | chr15:6156046-6155714 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 285-608 |
| Cow position: | chr15:8099395-8099711 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 286-607 |
| Cow position: | chr15:8750333-8750656 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 290-604 |
| Cow position: | chr15:37392399-37392721 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 209 |
| Conread position: | 304-608 |
| Cow position: | chr15:7934254-7934560 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 305-607 |
| Cow position: | chr15:17292362-17292677 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 218 |
| Conread position: | 305-608 |
| Cow position: | chr15:1764014-1764327 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 306-608 |
| Cow position: | chr15:12421241-12420930 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 307-453 |
| Cow position: | chr15:4682157-4682312 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 307-570 |
| Cow position: | chr15:328353-328628 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 307-608 |
| Cow position: | chr15:690716-691004 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 309-608 |
| Cow position: | chr15:44828722-44829030 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 278 |
Show alignments to all cow chromosomes.