Cow genome map


           Conread name:
           Emb1-C0005217_H15
        

               Conread position:
               8-157
               

               Cow position:
               chr18:56462524-56462371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               8-608
               

               Cow position:
               chr18:54171479-54170864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               10-350
               

               Cow position:
               chr18:29237195-29237544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               98-335
               

               Cow position:
               chr18:16842778-16842541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               164-346
               

               Cow position:
               chr18:51275714-51275529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               95, 6
               

               Conread position:
               177-297
               

               Cow position:
               chr18:33749953-33750071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               241-608
               

               Cow position:
               chr18:33750311-33750686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               260-448
               

               Cow position:
               chr18:16534301-16534489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               285-576
               

               Cow position:
               chr18:52651265-52651561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 6
               

               Conread position:
               286-429
               

               Cow position:
               chr18:24700767-24700616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               292-607
               

               Cow position:
               chr18:28973553-28973216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               305-604
               

               Cow position:
               chr18:33336225-33336534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 285
               
Show alignments to all cow chromosomes.