Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 8-162 |
| Cow position: | chr2:15062228-15062078 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 8-298 |
| Cow position: | chr2:2356641-2356348 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 9-343 |
| Cow position: | chr2:14822333-14822671 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 9-607 |
| Cow position: | chr2:39622130-39622726 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 9-608 |
| Cow position: | chr2:34565099-34564502 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 23 |
| Conread position: | 10-124 |
| Cow position: | chr2:41149828-41149941 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-139 |
| Cow position: | chr2:36053820-36053692 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-207 |
| Cow position: | chr2:1672840-1672638 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 10-345 |
| Cow position: | chr2:16289053-16289401 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 10-350 |
| Cow position: | chr2:15577739-15577394 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 10-591 |
| Cow position: | chr2:28643302-28642718 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 24 |
| Conread position: | 11-576 |
| Cow position: | chr2:5485452-5484887 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 23 |
| Conread position: | 30-332 |
| Cow position: | chr2:3836663-3836359 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 46-292 |
| Cow position: | chr2:28620972-28620732 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 71-607 |
| Cow position: | chr2:11729439-11729977 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 71-608 |
| Cow position: | chr2:42333293-42332750 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 98-350 |
| Cow position: | chr2:782141-781881 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 100-486 |
| Cow position: | chr2:28747748-28748148 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 115-586 |
| Cow position: | chr2:5963479-5962983 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 488 |
| Conread position: | 160-471 |
| Cow position: | chr2:1362819-1363144 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 113 |
| Conread position: | 161-350 |
| Cow position: | chr2:41149958-41150150 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 145, 71 |
| Conread position: | 161-450 |
| Cow position: | chr2:78741961-78742273 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 162-523 |
| Cow position: | chr2:7902684-7903051 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 164-592 |
| Cow position: | chr2:35355352-35355799 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 168-541 |
| Cow position: | chr2:37790164-37789805 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 170-529 |
| Cow position: | chr2:36030671-36030304 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 284 |
| Conread position: | 185-336 |
| Cow position: | chr2:15060852-15060693 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 218-608 |
| Cow position: | chr2:41686221-41686623 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 236-542 |
| Cow position: | chr2:49604693-49604989 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 285-607 |
| Cow position: | chr2:8118328-8118655 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 288-535 |
| Cow position: | chr2:69584834-69584578 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 291-442 |
| Cow position: | chr2:52152066-52151916 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 295-574 |
| Cow position: | chr2:5905067-5904781 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 262 |
| Conread position: | 305-465 |
| Cow position: | chr2:4926367-4926197 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 305-594 |
| Cow position: | chr2:24146668-24146965 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 306-607 |
| Cow position: | chr2:78762270-78762561 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 307-593 |
| Cow position: | chr2:5870547-5870251 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 307-608 |
| Cow position: | chr2:41172480-41172785 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 275 |
| Conread position: | 307-608 |
| Cow position: | chr2:54737310-54737620 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 280 |
Show alignments to all cow chromosomes.