Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 5-198 |
| Cow position: | chr22:37132171-37132361 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 153, 29 |
| Conread position: | 8-322 |
| Cow position: | chr22:46547861-46548170 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 8-576 |
| Cow position: | chr22:3306441-3305851 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 8-585 |
| Cow position: | chr22:23853621-23854213 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 8-608 |
| Cow position: | chr22:35907426-35906816 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 10-608 |
| Cow position: | chr22:13917796-13918415 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 198 |
| Conread position: | 11-400 |
| Cow position: | chr22:1283363-1282947 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 16-187 |
| Cow position: | chr22:8135910-8135731 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 34-152 |
| Cow position: | chr22:1270233-1270111 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 36-414 |
| Cow position: | chr22:310387-310771 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 190, 20 |
| Conread position: | 44-591 |
| Cow position: | chr22:1322131-1322684 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 46-428 |
| Cow position: | chr22:44609916-44610298 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 50-351 |
| Cow position: | chr22:41419370-41419062 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 98-350 |
| Cow position: | chr22:8740384-8740137 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 102-608 |
| Cow position: | chr22:6503090-6502558 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 145 |
| Conread position: | 159-608 |
| Cow position: | chr22:1269671-1269216 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 60 |
| Conread position: | 168-602 |
| Cow position: | chr22:11031883-11032322 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 187-607 |
| Cow position: | chr22:37132577-37133000 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 204-546 |
| Cow position: | chr22:8875776-8876132 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 51 |
| Conread position: | 260-592 |
| Cow position: | chr22:36183986-36184315 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 285-607 |
| Cow position: | chr22:17328486-17328159 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 305-521 |
| Cow position: | chr22:15851584-15851810 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 216 |
| Conread position: | 305-592 |
| Cow position: | chr22:48004803-48005102 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 306-575 |
| Cow position: | chr22:34599675-34599943 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 306-608 |
| Cow position: | chr22:44369361-44369052 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 307-471 |
| Cow position: | chr22:44490150-44490324 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 307-592 |
| Cow position: | chr22:27309508-27309218 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 276 |
| Conread position: | 307-608 |
| Cow position: | chr22:326899-326593 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 125 |
| Conread position: | 307-608 |
| Cow position: | chr22:537366-537674 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 307-608 |
| Cow position: | chr22:5308372-5308677 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 280 |
| Conread position: | 307-608 |
| Cow position: | chr22:18027544-18027855 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 281 |
| Conread position: | 308-454 |
| Cow position: | chr22:1522283-1522439 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.