Cow genome map

Conread name: Emb1-C0005217_H15

Conread position: 8-199
Cow position: chr3:29595413-29595611 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 26

Conread position: 8-608
Cow position: chr3:52864250-52863626 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 9-240
Cow position: chr3:3054780-3055006 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 14

Conread position: 9-537
Cow position: chr3:64357948-64357411 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 25

Conread position: 9-590
Cow position: chr3:66990984-66991573 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 7

Conread position: 10-156
Cow position: chr3:6685671-6685818 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 24

Conread position: 10-157
Cow position: chr3:19802870-19803021 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 24

Conread position: 10-202
Cow position: chr3:48230784-48230590 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 24

Conread position: 33-254
Cow position: chr3:63004501-63004271 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 109

Conread position: 44-527
Cow position: chr3:24591396-24590898 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 197

Conread position: 71-591
Cow position: chr3:15178671-15179188 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 72-297
Cow position: chr3:5391350-5391574 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 94

Conread position: 114-608
Cow position: chr3:2907762-2907266 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 141-350
Cow position: chr3:50127693-50127475 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 67

Conread position: 141-597
Cow position: chr3:58947643-58948122 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 329

Conread position: 160-592
Cow position: chr3:6685849-6686299 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 76

Conread position: 168-588
Cow position: chr3:4027829-4028227 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 43

Conread position: 185-330
Cow position: chr3:29597137-29597293 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 42

Conread position: 221-432
Cow position: chr3:38492764-38492971 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 98

Conread position: 240-575
Cow position: chr3:77423936-77424284 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 257-592
Cow position: chr3:36881768-36881425 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 13

Conread position: 260-607
Cow position: chr3:3981894-3982250 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 263-608
Cow position: chr3:45895397-45895038 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 263-608
Cow position: chr3:45974658-45975015 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 285-607
Cow position: chr3:5954005-5953679 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 6

Conread position: 285-607
Cow position: chr3:57484549-57484223 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 6

Conread position: 291-592
Cow position: chr3:46502719-46503027 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 19

Conread position: 306-447
Cow position: chr3:19944242-19944393 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 306-590
Cow position: chr3:63003347-63003057 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 307-588
Cow position: chr3:50011870-50012156 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 114

Conread position: 307-592
Cow position: chr3:3523214-3523506 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 307-592
Cow position: chr3:40339919-40339625 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 307-607
Cow position: chr3:37969241-37969547 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 86

Conread position: 307-608
Cow position: chr3:46679624-46679933 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 213

Conread position: 307-608
Cow position: chr3:50915525-50915834 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 308-608
Cow position: chr3:56340226-56339919 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 279

Show alignments to all cow chromosomes.