Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 8-453 |
| Cow position: | chr6:6476230-6475762 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 27 |
| Conread position: | 10-350 |
| Cow position: | chr6:38232539-38232879 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 24 |
| Conread position: | 12-217 |
| Cow position: | chr6:37116399-37116599 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 31-269 |
| Cow position: | chr6:43608079-43607834 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 71-356 |
| Cow position: | chr6:32330396-32330127 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 71-593 |
| Cow position: | chr6:15476899-15477439 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 71-608 |
| Cow position: | chr6:1100181-1099633 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 359 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 71-608 |
| Cow position: | chr6:35419833-35419298 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 167 |
| Conread position: | 82-590 |
| Cow position: | chr6:10643543-10644080 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 166 |
| Conread position: | 164-608 |
| Cow position: | chr6:2887269-2887731 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 65 |
| Conread position: | 168-608 |
| Cow position: | chr6:7179169-7178725 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 170-579 |
| Cow position: | chr6:33995224-33994805 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 176-602 |
| Cow position: | chr6:8021024-8021457 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 238-608 |
| Cow position: | chr6:38900998-38900621 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 257-607 |
| Cow position: | chr6:52693218-52693571 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 270-607 |
| Cow position: | chr6:1822423-1822084 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 276-501 |
| Cow position: | chr6:43607491-43607259 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 285-435 |
| Cow position: | chr6:913875-914032 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 285-576 |
| Cow position: | chr6:65841806-65842104 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 285-607 |
| Cow position: | chr6:55544105-55543776 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 6 |
| Conread position: | 286-607 |
| Cow position: | chr6:36526269-36526598 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 289-498 |
| Cow position: | chr6:4508203-4507984 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 289-608 |
| Cow position: | chr6:64715452-64715779 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 298 |
| Conread position: | 292-608 |
| Cow position: | chr6:13317277-13316957 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 305-585 |
| Cow position: | chr6:40867322-40867034 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 306-608 |
| Cow position: | chr6:65928203-65928515 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 307-608 |
| Cow position: | chr6:26670624-26670324 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 261 |
| Conread position: | 307-608 |
| Cow position: | chr6:43617949-43618259 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 280 |
Show alignments to all cow chromosomes.