Cow genome map
| Conread name: | Emb1-C0005217_H15 |
| Conread position: | 8-349 |
| Cow position: | chrX:21587288-21587647 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 9-575 |
| Cow position: | chrX:6282983-6282402 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 10-157 |
| Cow position: | chrX:31725123-31725274 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 30-608 |
| Cow position: | chrX:2536682-2536067 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 219 |
| Conread position: | 36-185 |
| Cow position: | chrX:27959858-27960013 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 37-593 |
| Cow position: | chrX:26427857-26427281 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 375 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 71-350 |
| Cow position: | chrX:34991739-34992022 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 71-603 |
| Cow position: | chrX:22130441-22129864 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 71-608 |
| Cow position: | chrX:17668058-17667515 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 78-594 |
| Cow position: | chrX:13052865-13053388 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 155-575 |
| Cow position: | chrX:31081890-31082322 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 157-567 |
| Cow position: | chrX:6015156-6014718 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 161-447 |
| Cow position: | chrX:16016751-16016453 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 161-604 |
| Cow position: | chrX:44387057-44387503 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 164-592 |
| Cow position: | chrX:40246951-40246511 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 92 |
| Conread position: | 164-608 |
| Cow position: | chrX:20697157-20696720 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 62 |
| Conread position: | 168-347 |
| Cow position: | chrX:30004097-30004280 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 169-608 |
| Cow position: | chrX:18534422-18534849 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 180-350 |
| Cow position: | chrX:31726053-31726232 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 257-604 |
| Cow position: | chrX:23019354-23019704 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 284-491 |
| Cow position: | chrX:28603403-28603192 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 284-604 |
| Cow position: | chrX:26767142-26766815 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 286-608 |
| Cow position: | chrX:29285488-29285820 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 210 |
| Conread position: | 291-592 |
| Cow position: | chrX:12478784-12479091 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 305-607 |
| Cow position: | chrX:320541-320848 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 274 |
| Conread position: | 305-607 |
| Cow position: | chrX:970841-971153 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 279 |
| Conread position: | 306-592 |
| Cow position: | chrX:16363056-16362761 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 281 |
| Conread position: | 306-608 |
| Cow position: | chrX:30055669-30055356 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 283 |
| Conread position: | 307-592 |
| Cow position: | chrX:28562145-28561852 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 171 |
| Conread position: | 307-604 |
| Cow position: | chrX:28634347-28634043 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 308-604 |
| Cow position: | chrX:39563861-39563558 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 274 |
| Conread position: | 319-608 |
| Cow position: | chrX:1689698-1689413 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 29 |
Show alignments to all cow chromosomes.