Cow genome map
| Conread name: | Emb1-C0005218_C12 |
| Conread position: | 1-238 |
| Cow position: | chr1:64697001-64697233 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 1-239 |
| Cow position: | chr1:41782035-41781787 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 154 |
| Conread position: | 1-375 |
| Cow position: | chr1:78923510-78923887 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 1-414 |
| Cow position: | chr1:55155717-55155307 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 1-448 |
| Cow position: | chr1:98658627-98658180 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 1-449 |
| Cow position: | chr1:24652559-24653006 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 1-449 |
| Cow position: | chr1:40511734-40511281 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 1-450 |
| Cow position: | chr1:77110788-77110352 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 314 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 4-179 |
| Cow position: | chr1:30519884-30520065 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 4-435 |
| Cow position: | chr1:82477263-82477704 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 4-449 |
| Cow position: | chr1:28874366-28874809 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 4-449 |
| Cow position: | chr1:62243368-62242911 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 4-449 |
| Cow position: | chr1:79635699-79635257 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 4-451 |
| Cow position: | chr1:93855806-93856256 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 5-179 |
| Cow position: | chr1:41519479-41519300 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 5-289 |
| Cow position: | chr1:72038275-72037986 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 5-375 |
| Cow position: | chr1:80445439-80445819 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 5-394 |
| Cow position: | chr1:30063646-30064065 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 5-403 |
| Cow position: | chr1:86595204-86594798 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-407 |
| Cow position: | chr1:53364856-53365236 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 5-417 |
| Cow position: | chr1:38419962-38420353 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 5-435 |
| Cow position: | chr1:17011444-17011010 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-435 |
| Cow position: | chr1:20830183-20830623 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 146 |
| Conread position: | 5-435 |
| Cow position: | chr1:39545076-39545515 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 5-435 |
| Cow position: | chr1:55275742-55275303 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 5-435 |
| Cow position: | chr1:67002446-67002881 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-435 |
| Cow position: | chr1:67833841-67833408 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-435 |
| Cow position: | chr1:80357886-80357442 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 5-435 |
| Cow position: | chr1:85792969-85793409 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 5-435 |
| Cow position: | chr1:91900314-91900750 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 5-444 |
| Cow position: | chr1:9259773-9260222 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-445 |
| Cow position: | chr1:57658178-57658632 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 148 |
| Conread position: | 5-445 |
| Cow position: | chr1:81288423-81288872 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-447 |
| Cow position: | chr1:26584388-26584839 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-447 |
| Cow position: | chr1:33713359-33713820 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 143 |
| Conread position: | 5-447 |
| Cow position: | chr1:33897548-33898000 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-447 |
| Cow position: | chr1:40056392-40056844 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 5-447 |
| Cow position: | chr1:58177827-58177392 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 5-447 |
| Cow position: | chr1:89494923-89494490 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 5-449 |
| Cow position: | chr1:17035307-17034852 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-449 |
| Cow position: | chr1:56143056-56142601 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-449 |
| Cow position: | chr1:86546847-86546395 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 5-450 |
| Cow position: | chr1:69767868-69768322 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 6-304 |
| Cow position: | chr1:66487011-66487312 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 6-449 |
| Cow position: | chr1:91597415-91596970 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 7-144 |
| Cow position: | chr1:57569258-57569402 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 7-304 |
| Cow position: | chr1:18193185-18193494 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 7-353 |
| Cow position: | chr1:59934675-59935043 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 7-430 |
| Cow position: | chr1:25551254-25551687 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 7-441 |
| Cow position: | chr1:17940482-17940036 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 7-444 |
| Cow position: | chr1:72082068-72082493 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 7-444 |
| Cow position: | chr1:82922861-82922426 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 7-445 |
| Cow position: | chr1:33552219-33552667 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 7-445 |
| Cow position: | chr1:102433750-102433302 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 7-447 |
| Cow position: | chr1:3384659-3384200 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-447 |
| Cow position: | chr1:3933966-3933519 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 7-449 |
| Cow position: | chr1:5503260-5503706 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 7-449 |
| Cow position: | chr1:31364806-31364361 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr1:32566633-32566189 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 7-449 |
| Cow position: | chr1:42737738-42738171 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr1:62804879-62804434 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 7-449 |
| Cow position: | chr1:63604480-63604029 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 7-449 |
| Cow position: | chr1:65387612-65388054 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr1:69404297-69404742 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 7-449 |
| Cow position: | chr1:76620171-76619737 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr1:99914718-99915177 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 8-449 |
| Cow position: | chr1:74285377-74284937 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 9-362 |
| Cow position: | chr1:93235998-93236346 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 9-401 |
| Cow position: | chr1:31417203-31416814 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 11 |
| Conread position: | 9-441 |
| Cow position: | chr1:21088725-21089165 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 9-447 |
| Cow position: | chr1:38417436-38417863 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 9-447 |
| Cow position: | chr1:81862682-81862246 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 9-449 |
| Cow position: | chr1:24443069-24442619 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 9-449 |
| Cow position: | chr1:26517595-26517147 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 9-449 |
| Cow position: | chr1:34693981-34694428 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 9-449 |
| Cow position: | chr1:76750667-76750230 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 10-345 |
| Cow position: | chr1:76702996-76702670 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 10-449 |
| Cow position: | chr1:73069761-73069318 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 12-447 |
| Cow position: | chr1:8826354-8826794 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 16-447 |
| Cow position: | chr1:87969627-87970048 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 17-341 |
| Cow position: | chr1:31359705-31360019 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 17-393 |
| Cow position: | chr1:39539643-39539294 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 17-435 |
| Cow position: | chr1:29363598-29364023 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 129 |
| Conread position: | 17-445 |
| Cow position: | chr1:68606243-68605809 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 17-448 |
| Cow position: | chr1:30533716-30533283 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 17-448 |
| Cow position: | chr1:81777730-81778185 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 17-448 |
| Cow position: | chr1:102781009-102780601 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 17-449 |
| Cow position: | chr1:30074178-30074610 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 17-449 |
| Cow position: | chr1:88132079-88132518 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 17-449 |
| Cow position: | chr1:91891816-91891379 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 17-451 |
| Cow position: | chr1:59207772-59207335 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 18-433 |
| Cow position: | chr1:51965584-51966001 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 19-281 |
| Cow position: | chr1:45018331-45018067 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 19-289 |
| Cow position: | chr1:82911848-82911572 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 20-406 |
| Cow position: | chr1:92871227-92871626 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 22-430 |
| Cow position: | chr1:18026444-18026017 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 23-329 |
| Cow position: | chr1:89482132-89482438 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 23-416 |
| Cow position: | chr1:16216154-16215786 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 23-431 |
| Cow position: | chr1:77462972-77463369 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 23-448 |
| Cow position: | chr1:55320759-55320343 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 23-449 |
| Cow position: | chr1:49972851-49972431 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 25-449 |
| Cow position: | chr1:12060885-12060466 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 26-174 |
| Cow position: | chr1:31772454-31772600 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 26-435 |
| Cow position: | chr1:10723894-10724307 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 27-445 |
| Cow position: | chr1:50248388-50247971 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 28-236 |
| Cow position: | chr1:41288379-41288588 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 28-349 |
| Cow position: | chr1:67316132-67316430 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 163, 8 |
| Conread position: | 28-387 |
| Cow position: | chr1:74255211-74254837 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 34-175 |
| Cow position: | chr1:65923361-65923217 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 110 |
| Conread position: | 34-411 |
| Cow position: | chr1:40643556-40643923 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 162, 105 |
| Conread position: | 36-448 |
| Cow position: | chr1:67909877-67910288 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 68 |
| Conread position: | 36-449 |
| Cow position: | chr1:52357922-52357517 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 36-449 |
| Cow position: | chr1:55777915-55778328 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 37-375 |
| Cow position: | chr1:21998091-21997748 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 155 |
| Conread position: | 38-435 |
| Cow position: | chr1:50210516-50210114 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 108 |
| Conread position: | 38-448 |
| Cow position: | chr1:34912299-34912714 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 96 |
| Conread position: | 39-348 |
| Cow position: | chr1:7141320-7141001 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 41-267 |
| Cow position: | chr1:86611459-86611692 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 42-402 |
| Cow position: | chr1:76095730-76095370 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 42-431 |
| Cow position: | chr1:23091986-23092352 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 48-448 |
| Cow position: | chr1:72945081-72945474 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 95 |
| Conread position: | 55-449 |
| Cow position: | chr1:43570068-43569689 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 80 |
| Conread position: | 61-312 |
| Cow position: | chr1:33581143-33580889 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 63-446 |
| Cow position: | chr1:56164887-56165274 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 64-435 |
| Cow position: | chr1:90607526-90607151 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 65-447 |
| Cow position: | chr1:86508554-86508155 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 69-414 |
| Cow position: | chr1:61541656-61541994 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 70-447 |
| Cow position: | chr1:29035661-29036036 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 74-411 |
| Cow position: | chr1:54407243-54406903 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 74-415 |
| Cow position: | chr1:34507789-34508123 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 88-450 |
| Cow position: | chr1:89769161-89768798 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 90-447 |
| Cow position: | chr1:88387609-88387964 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 111-430 |
| Cow position: | chr1:29226286-29226590 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 315, 70 |
| Conread position: | 135-447 |
| Cow position: | chr1:53559953-53559635 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 60 |
Show alignments to all cow chromosomes.