Cow genome map

Conread name: Emb1-C0005218_C12

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 27

Conread position: 1-239
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 154

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 1-414
Cow position:
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 1-448
Cow position:
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 1-449
Cow position:
Alignm length: 457
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 115

Conread position: 1-449
Cow position:
Alignm length: 459
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 1-450
Cow position:
Alignm length: 463
Alignm identity: 314
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 143

Conread position: 4-179
Cow position:
Alignm length: 184
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 59

Conread position: 4-435
Cow position:
Alignm length: 443
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 145

Conread position: 4-449
Cow position:
Alignm length: 453
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 25

Conread position: 4-449
Cow position:
Alignm length: 460
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 4-449
Cow position:
Alignm length: 458
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 39

Conread position: 4-451
Cow position:
Alignm length: 456
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 119

Conread position: 5-179
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 34

Conread position: 5-289
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 38

Conread position: 5-375
Cow position:
Alignm length: 382
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 143

Conread position: 5-394
Cow position:
Alignm length: 422
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 34

Conread position: 5-403
Cow position:
Alignm length: 411
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-407
Cow position:
Alignm length: 412
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 44

Conread position: 5-417
Cow position:
Alignm length: 419
Alignm identity: 284
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 79

Conread position: 5-435
Cow position:
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 146

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 5-435
Cow position:
Alignm length: 441
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 449
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 5-444
Cow position:
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-445
Cow position:
Alignm length: 459
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 148

Conread position: 5-445
Cow position:
Alignm length: 453
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 464
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 143

Conread position: 5-447
Cow position:
Alignm length: 455
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 454
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 5-447
Cow position:
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 5-447
Cow position:
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 5-449
Cow position:
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-449
Cow position:
Alignm length: 459
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-449
Cow position:
Alignm length: 455
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 5-450
Cow position:
Alignm length: 458
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 6-304
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 22

Conread position: 6-449
Cow position:
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 7-144
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 138

Conread position: 7-304
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 140

Conread position: 7-353
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 147

Conread position: 7-430
Cow position:
Alignm length: 441
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 142

Conread position: 7-441
Cow position:
Alignm length: 448
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 7-444
Cow position:
Alignm length: 446
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 7-444
Cow position:
Alignm length: 448
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 7-445
Cow position:
Alignm length: 450
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 7-445
Cow position:
Alignm length: 452
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 138

Conread position: 7-447
Cow position:
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-447
Cow position:
Alignm length: 451
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 140

Conread position: 7-449
Cow position:
Alignm length: 453
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 139

Conread position: 7-449
Cow position:
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 457
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 7-449
Cow position:
Alignm length: 448
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 450
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 7-449
Cow position:
Alignm length: 453
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 7-449
Cow position:
Alignm length: 450
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 118

Conread position: 7-449
Cow position:
Alignm length: 446
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 467
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 142

Conread position: 8-449
Cow position:
Alignm length: 446
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 9-362
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 11

Conread position: 9-401
Cow position:
Alignm length: 399
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 11

Conread position: 9-441
Cow position:
Alignm length: 446
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 30

Conread position: 9-447
Cow position:
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 9-447
Cow position:
Alignm length: 448
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 11

Conread position: 9-449
Cow position:
Alignm length: 452
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 136

Conread position: 9-449
Cow position:
Alignm length: 452
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 9-449
Cow position:
Alignm length: 454
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 9-449
Cow position:
Alignm length: 449
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 10-345
Cow position:
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 10-449
Cow position:
Alignm length: 452
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 12-447
Cow position:
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 16-447
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 20

Conread position: 17-341
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 128

Conread position: 17-393
Cow position:
Alignm length: 383
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 63

Conread position: 17-435
Cow position:
Alignm length: 427
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 17-445
Cow position:
Alignm length: 438
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 17-448
Cow position:
Alignm length: 439
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 17-448
Cow position:
Alignm length: 461
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 17-448
Cow position:
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 64

Conread position: 17-449
Cow position:
Alignm length: 438
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 17-449
Cow position:
Alignm length: 442
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 125

Conread position: 17-449
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 125

Conread position: 17-451
Cow position:
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 18-433
Cow position:
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 18

Conread position: 19-281
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 115

Conread position: 19-289
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 17

Conread position: 20-406
Cow position:
Alignm length: 403
Alignm identity: 252
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 8

Conread position: 22-430
Cow position:
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 32

Conread position: 23-329
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 123

Conread position: 23-416
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 118

Conread position: 23-431
Cow position:
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 23-448
Cow position:
Alignm length: 431
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 16

Conread position: 23-449
Cow position:
Alignm length: 431
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 13

Conread position: 25-449
Cow position:
Alignm length: 431
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 26-174
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 10

Conread position: 26-435
Cow position:
Alignm length: 419
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 10

Conread position: 27-445
Cow position:
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 28-236
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 105

Conread position: 28-349
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 163, 8

Conread position: 28-387
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 120

Conread position: 34-175
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 110

Conread position: 34-411
Cow position:
Alignm length: 382
Alignm identity: 241
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 162, 105

Conread position: 36-448
Cow position:
Alignm length: 422
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 68

Conread position: 36-449
Cow position:
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 17

Conread position: 36-449
Cow position:
Alignm length: 425
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 8

Conread position: 37-375
Cow position:
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 155

Conread position: 38-435
Cow position:
Alignm length: 404
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 108

Conread position: 38-448
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 96

Conread position: 39-348
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 68, 5

Conread position: 41-267
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 23

Conread position: 42-402
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 42-431
Cow position:
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 48-448
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 95

Conread position: 55-449
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 80

Conread position: 61-312
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 85

Conread position: 63-446
Cow position:
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 75

Conread position: 64-435
Cow position:
Alignm length: 378
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 79

Conread position: 65-447
Cow position:
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 69-414
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 70-447
Cow position:
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 74-411
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 113

Conread position: 74-415
Cow position:
Alignm length: 348
Alignm identity: 227
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 67

Conread position: 88-450
Cow position:
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 55

Conread position: 90-447
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 51

Conread position: 111-430
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 315, 70

Conread position: 135-447
Cow position:
Alignm length: 324
Alignm identity: 208
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 60

Show alignments to all cow chromosomes.