Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               304
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               4-366
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               4-444
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               5-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               5-274
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               5-390
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               5-396
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-417
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               5-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               6-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               7-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               8-448
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               9-273
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 11
               

               Conread position:
               10-402
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               236, 99
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               14-449
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               15-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               17-453
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               23-220
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               23-322
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               23-441
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               25-417
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               28-383
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               35-449
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               36-411
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               36-449
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               37-435
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 104
               

               Conread position:
               37-449
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 102
               

               Conread position:
               38-392
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               41-402
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 17
               

               Conread position:
               44-449
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               53-324
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               56-258
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               64-449
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 79
               

               Conread position:
               67-179
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               70-430
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               70-449
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               79-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               120-415
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               74, 64
               
Show alignments to all cow chromosomes.