Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               108, 12
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               2-158
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               4-448
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               5-185
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               5-192
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-206
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               5-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 143
               

               Conread position:
               5-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 144
               

               Conread position:
               5-393
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               5-394
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               5-411
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 145
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               6-309
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               6-432
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               6-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               7-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               7-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               7-297
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               7-417
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               7-446
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               8-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               9-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               10-348
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               12-168
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               14-435
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               17-263
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               17-450
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               22-162
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               22-333
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               23-297
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               23-327
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               23-349
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               23-430
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               23-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               23-447
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               24-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               25-155
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               25-179
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 121
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 33
               

               Conread position:
               28-179
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               28-213
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               28-351
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               28-366
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 153
               

               Conread position:
               28-397
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               162, 120
               

               Conread position:
               28-401
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 129
               

               Conread position:
               28-411
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               29-413
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               32-242
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               33-447
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               34-196
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               34-449
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               36-417
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               204, 104
               

               Conread position:
               36-427
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               38-243
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               38-435
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               39-354
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 67
               

               Conread position:
               60-447
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               61-296
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               71-449
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               92-445
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               103-449
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 38
               
Show alignments to all cow chromosomes.