Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               4-124
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-338
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               4-396
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-416
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               4-416
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               4-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-371
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               6-300
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-431
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               7-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-263
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               7-412
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               9-282
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               10-373
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               11-449
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               17-300
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               17-348
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               17-435
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               17-435
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 132
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               18-391
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               181, 94
               

               Conread position:
               18-405
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               23-294
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               23-433
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               28-349
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 8
               

               Conread position:
               28-391
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               28-430
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               38-405
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               99, 46
               

               Conread position:
               38-417
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               38-447
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               76, 6
               

               Conread position:
               38-449
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 16
               

               Conread position:
               41-435
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               212, 52
               

               Conread position:
               60-447
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 86
               

               Conread position:
               61-447
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               61-450
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               71-405
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               73-431
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               126, 19
               

               Conread position:
               74-449
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               79-433
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               103-385
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               81, 17
               

               Conread position:
               115-413
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               137-449
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 128
               
Show alignments to all cow chromosomes.