Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 25
               

               Conread position:
               4-444
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               5-179
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               5-179
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-251
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               12, 145
               

               Conread position:
               5-351
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-375
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               5-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               6-435
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               7-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               7-434
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               8-412
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 98
               

               Conread position:
               9-355
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               9-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               16-429
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               17-263
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 131
               

               Conread position:
               17-273
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               17-296
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               17-320
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               17-434
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               17-435
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 19
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 129
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 23
               

               Conread position:
               18-449
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               18-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               20-402
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 10
               

               Conread position:
               23-296
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               23-299
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               23-407
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 13
               

               Conread position:
               23-430
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               23-450
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 13
               

               Conread position:
               24-356
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 117
               

               Conread position:
               24-401
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               24-405
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               161, 12
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 22
               

               Conread position:
               28-178
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               28-296
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               28-447
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               34-449
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               37-411
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               39-449
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               68-435
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               74-411
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               75-411
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               112-430
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               130-433
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               140-449
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               40, 119
               
Show alignments to all cow chromosomes.