Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               4-110
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               4-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               4-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               4-450
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-394
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               5-402
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-428
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               6-448
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               7-315
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-352
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-415
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               7-433
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 141
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               8-445
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               8-447
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 12
               

               Conread position:
               9-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               9-445
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               10-435
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               10-448
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 141
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               11-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               17-274
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               17-326
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               17-406
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               17-427
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               17-433
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 131
               

               Conread position:
               19-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               20-306
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               23-239
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               23-317
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               23-426
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               23-430
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 13
               

               Conread position:
               23-435
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 167
               

               Conread position:
               24-306
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 122
               

               Conread position:
               32-242
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               77, 111
               

               Conread position:
               32-435
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               34-434
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               36-431
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               153, 22
               

               Conread position:
               38-448
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               38-449
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               41-449
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               202, 78
               

               Conread position:
               44-432
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               47-435
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               48-447
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 91
               

               Conread position:
               52-449
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 91
               

               Conread position:
               57-447
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               68-449
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               79-402
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               79-436
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               82-326
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               82-453
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               94-445
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               103-449
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               121-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               137-445
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               145-449
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               254-450
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 131
               
Show alignments to all cow chromosomes.