Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               5-269
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               5-348
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-359
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               7-316
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               8-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               8-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               9-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               9-330
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               9-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               9-441
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               17-301
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               17-348
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 23
               

               Conread position:
               20-408
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 237
               

               Conread position:
               25-405
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               28-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 107
               

               Conread position:
               28-391
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               30-355
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 186
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               133, 76
               

               Conread position:
               34-449
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               35-449
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               36-447
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               142, 88
               

               Conread position:
               36-450
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               38-402
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               38-408
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               41-446
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               44-184
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 97
               

               Conread position:
               49-451
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               61-237
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               64-386
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               211, 144
               

               Conread position:
               92-431
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               95-405
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               107-441
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               116-449
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               129-393
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               99, 11
               
Show alignments to all cow chromosomes.