Cow genome map
| Conread name: | Emb1-C0005218_C12 |
| Conread position: | 1-445 |
| Cow position: | chr19:39667200-39666763 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-449 |
| Cow position: | chr19:161800-161359 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 3-444 |
| Cow position: | chr19:28594873-28595321 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 4-426 |
| Cow position: | chr19:32210739-32210306 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 4-448 |
| Cow position: | chr19:1587905-1587449 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 4-449 |
| Cow position: | chr19:342562-343038 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 140 |
| Conread position: | 5-247 |
| Cow position: | chr19:33527449-33527701 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 5-295 |
| Cow position: | chr19:43145050-43145343 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 5-357 |
| Cow position: | chr19:50723889-50724244 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 5-375 |
| Cow position: | chr19:40816175-40815796 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 144 |
| Conread position: | 5-409 |
| Cow position: | chr19:9706816-9706427 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 5-435 |
| Cow position: | chr19:5900174-5899734 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-435 |
| Cow position: | chr19:20106065-20106501 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 123 |
| Conread position: | 5-444 |
| Cow position: | chr19:773937-774388 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-447 |
| Cow position: | chr19:7343405-7343854 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-449 |
| Cow position: | chr19:52150348-52149893 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 6-242 |
| Cow position: | chr19:33653384-33653156 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 6-249 |
| Cow position: | chr19:44031708-44031957 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 6-431 |
| Cow position: | chr19:788744-789161 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 6-433 |
| Cow position: | chr19:39636-40068 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 7-449 |
| Cow position: | chr19:4386957-4387390 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr19:12774441-12774893 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 7-449 |
| Cow position: | chr19:33874765-33875200 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr19:39184202-39183755 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 8-449 |
| Cow position: | chr19:173596-174048 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 8-449 |
| Cow position: | chr19:5730202-5730633 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 9-160 |
| Cow position: | chr19:135444-135302 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 9-435 |
| Cow position: | chr19:35384270-35383840 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 291 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 9-441 |
| Cow position: | chr19:28405359-28404942 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 9-445 |
| Cow position: | chr19:205850-206293 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 12-435 |
| Cow position: | chr19:5249381-5248965 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 17-261 |
| Cow position: | chr19:1489648-1489395 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 17-449 |
| Cow position: | chr19:28580310-28579878 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 23-177 |
| Cow position: | chr19:25788787-25788633 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 23-426 |
| Cow position: | chr19:30756578-30756979 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 23-449 |
| Cow position: | chr19:40851103-40850679 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 24-244 |
| Cow position: | chr19:29141295-29141518 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 16, 121 |
| Conread position: | 25-449 |
| Cow position: | chr19:2272747-2272327 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 25-477 |
| Cow position: | chr19:376354-375909 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 28-432 |
| Cow position: | chr19:40794878-40794473 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 35-447 |
| Cow position: | chr19:166759-166343 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 38-349 |
| Cow position: | chr19:9552805-9552485 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 54-360 |
| Cow position: | chr19:19178748-19178438 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 67-396 |
| Cow position: | chr19:23400827-23400505 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 71-404 |
| Cow position: | chr19:3429012-3429346 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 112-441 |
| Cow position: | chr19:1660121-1660444 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 37 |
Show alignments to all cow chromosomes.