Cow genome map

Conread name: Emb1-C0005218_C12

Conread position: 1-244
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 143

Conread position: 1-439
Cow position:
Alignm length: 455
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 1-441
Cow position:
Alignm length: 461
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 1-445
Cow position:
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 21

Conread position: 1-447
Cow position:
Alignm length: 477
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 147

Conread position: 1-449
Cow position:
Alignm length: 457
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 2-273
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 38

Conread position: 2-327
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 11

Conread position: 2-445
Cow position:
Alignm length: 453
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 2-448
Cow position:
Alignm length: 453
Alignm identity: 303
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 26

Conread position: 3-158
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 35

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 18

Conread position: 3-402
Cow position:
Alignm length: 428
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 4-366
Cow position:
Alignm length: 365
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 89

Conread position: 4-443
Cow position:
Alignm length: 453
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 145

Conread position: 4-444
Cow position:
Alignm length: 450
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 4-447
Cow position:
Alignm length: 452
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 4-449
Cow position:
Alignm length: 462
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 148

Conread position: 4-449
Cow position:
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 5-162
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 15

Conread position: 5-241
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 48

Conread position: 5-328
Cow position:
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 5-394
Cow position:
Alignm length: 399
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 33

Conread position: 5-405
Cow position:
Alignm length: 408
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 5-430
Cow position:
Alignm length: 440
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 5-433
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 5-433
Cow position:
Alignm length: 440
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 5-434
Cow position:
Alignm length: 441
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 5-435
Cow position:
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 424

Conread position: 5-435
Cow position:
Alignm length: 441
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 5-436
Cow position:
Alignm length: 457
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-441
Cow position:
Alignm length: 455
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 5-445
Cow position:
Alignm length: 451
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 5-445
Cow position:
Alignm length: 453
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 452
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 5-447
Cow position:
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 452
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-449
Cow position:
Alignm length: 455
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 82

Conread position: 5-449
Cow position:
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 5-449
Cow position:
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 5-449
Cow position:
Alignm length: 458
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 5-451
Cow position:
Alignm length: 460
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 6-293
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 7

Conread position: 6-406
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 32

Conread position: 6-417
Cow position:
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 7-131
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 105, 29

Conread position: 7-177
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 46

Conread position: 7-371
Cow position:
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 84

Conread position: 7-434
Cow position:
Alignm length: 442
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 7-445
Cow position:
Alignm length: 454
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 134

Conread position: 7-447
Cow position:
Alignm length: 456
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 7-448
Cow position:
Alignm length: 452
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 142

Conread position: 7-448
Cow position:
Alignm length: 449
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 454
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 7-449
Cow position:
Alignm length: 451
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 7-449
Cow position:
Alignm length: 455
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 7-449
Cow position:
Alignm length: 457
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 144

Conread position: 7-449
Cow position:
Alignm length: 453
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 138

Conread position: 7-449
Cow position:
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 7-449
Cow position:
Alignm length: 455
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 7-449
Cow position:
Alignm length: 460
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 8-177
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 30

Conread position: 8-345
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 9-346
Cow position:
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 9-422
Cow position:
Alignm length: 436
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 9-431
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 9-435
Cow position:
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 9-441
Cow position:
Alignm length: 435
Alignm identity: 297
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 138, 11

Conread position: 9-447
Cow position:
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 9-449
Cow position:
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 9-449
Cow position:
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 10-289
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 12

Conread position: 10-449
Cow position:
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 98

Conread position: 13-417
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 22

Conread position: 16-397
Cow position:
Alignm length: 390
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 16-449
Cow position:
Alignm length: 445
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 17

Conread position: 17-441
Cow position:
Alignm length: 431
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 19

Conread position: 23-449
Cow position:
Alignm length: 432
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 24-257
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 25-435
Cow position:
Alignm length: 422
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 11

Conread position: 27-376
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 40

Conread position: 28-287
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 8

Conread position: 28-351
Cow position:
Alignm length: 335
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 13

Conread position: 28-401
Cow position:
Alignm length: 378
Alignm identity: 241
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 8

Conread position: 28-447
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 28-447
Cow position:
Alignm length: 427
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 118

Conread position: 28-447
Cow position:
Alignm length: 425
Alignm identity: 280
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 52

Conread position: 29-177
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 116

Conread position: 34-449
Cow position:
Alignm length: 422
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 19

Conread position: 38-449
Cow position:
Alignm length: 417
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 70

Conread position: 42-449
Cow position:
Alignm length: 414
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 101

Conread position: 42-451
Cow position:
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 45-420
Cow position:
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 52-413
Cow position:
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 87

Conread position: 53-296
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 26

Conread position: 53-449
Cow position:
Alignm length: 402
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 90

Conread position: 58-237
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 88

Conread position: 61-396
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 81

Conread position: 70-449
Cow position:
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 71-349
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 71

Conread position: 72-449
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 35

Conread position: 93-435
Cow position:
Alignm length: 346
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 94-416
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 121

Conread position: 115-449
Cow position:
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 116-428
Cow position:
Alignm length: 317
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 7

Conread position: 130-296
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 11

Conread position: 137-448
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 47

Conread position: 137-450
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 47

Conread position: 149-449
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 144

Show alignments to all cow chromosomes.