Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-138
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               5-174
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               5-178
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               5-179
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               5-266
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 144
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               5-390
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               5-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               6-179
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               12, 144
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-444
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               9-441
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               9-445
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               17-317
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 23
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               18-446
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               18-448
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               24-314
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               27-449
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 9
               

               Conread position:
               28-320
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 109
               

               Conread position:
               32-404
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 297
               

               Conread position:
               34-432
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               35-246
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               160, 80
               

               Conread position:
               43-449
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 36
               

               Conread position:
               53-445
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               92-282
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               102-362
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 82
               

               Conread position:
               131-422
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 9
               
Show alignments to all cow chromosomes.