Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-106
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               4-200
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               5-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-272
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-306
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               5-382
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 141
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               6-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-349
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-406
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               6-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 142
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               7-375
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-419
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               9-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               9-307
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               9-402
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               9-414
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               9-444
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               10-447
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               13-431
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               14-430
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 127
               

               Conread position:
               17-165
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 127
               

               Conread position:
               17-445
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               18-449
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               20-174
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               24-447
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               28-376
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               28-390
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               32-404
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               32-447
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               32-447
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               35-448
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 117
               

               Conread position:
               36-432
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 66
               

               Conread position:
               37-339
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               44-251
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               131, 68
               

               Conread position:
               45-445
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               53-373
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               55-367
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 26
               

               Conread position:
               85-315
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               88-328
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               90-447
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               95-299
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               104-411
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               137-348
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               143-405
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               144-449
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 40
               
Show alignments to all cow chromosomes.