Cow genome map
Conread name: | Emb1-C0005218_C12 |
Conread position: | 1-106 |
Cow position: | chr22:1323438-1323548 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 1-198 |
Cow position: | chr22:34600578-34600781 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 17, 96 |
Conread position: | 1-239 |
Cow position: | chr22:37134308-37134553 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 10, 17 |
Conread position: | 1-280 |
Cow position: | chr22:11033344-11033610 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 208 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 1-447 |
Cow position: | chr22:1281488-1281046 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 21 |
Conread position: | 1-448 |
Cow position: | chr22:23800973-23800543 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 1-452 |
Cow position: | chr22:19243632-19244075 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 145 |
Conread position: | 3-447 |
Cow position: | chr22:21195258-21194809 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 36 |
Conread position: | 4-200 |
Cow position: | chr22:2394750-2394549 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 18, 142 |
Conread position: | 4-428 |
Cow position: | chr22:1268517-1268083 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 144 |
Conread position: | 4-449 |
Cow position: | chr22:559469-559018 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 35 |
Conread position: | 5-258 |
Cow position: | chr22:8120841-8120588 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 13, 38 |
Conread position: | 5-272 |
Cow position: | chr22:7304417-7304142 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-306 |
Cow position: | chr22:6501898-6501597 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 5-382 |
Cow position: | chr22:24951794-24952181 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-433 |
Cow position: | chr22:10908599-10908161 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-434 |
Cow position: | chr22:46580480-46580042 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-435 |
Cow position: | chr22:694861-695289 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-435 |
Cow position: | chr22:1880041-1880481 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-435 |
Cow position: | chr22:3277120-3276680 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 34 |
Conread position: | 5-435 |
Cow position: | chr22:11803814-11803376 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 146 |
Conread position: | 5-435 |
Cow position: | chr22:27308537-27308101 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 112 |
Conread position: | 5-435 |
Cow position: | chr22:44492292-44492725 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 144 |
Conread position: | 5-447 |
Cow position: | chr22:538343-538797 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 142 |
Conread position: | 5-447 |
Cow position: | chr22:44348621-44348179 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 135 |
Conread position: | 5-447 |
Cow position: | chr22:44368241-44367793 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 18 |
Conread position: | 5-447 |
Cow position: | chr22:46585326-46584880 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 34 |
Conread position: | 5-448 |
Cow position: | chr22:46614542-46614990 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 141 |
Conread position: | 5-449 |
Cow position: | chr22:3305358-3304913 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 61 |
Conread position: | 6-297 |
Cow position: | chr22:316753-317043 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 6-349 |
Cow position: | chr22:18028526-18028879 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 6-406 |
Cow position: | chr22:13547533-13547128 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 272 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 14, 141 |
Conread position: | 6-431 |
Cow position: | chr22:39689723-39690128 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 289 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 6-433 |
Cow position: | chr22:6021905-6022327 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 6-447 |
Cow position: | chr22:16202151-16202601 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 142 |
Conread position: | 6-447 |
Cow position: | chr22:35670425-35669982 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 91 |
Conread position: | 7-375 |
Cow position: | chr22:18815124-18814749 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 7-419 |
Cow position: | chr22:35906149-35905725 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 7-449 |
Cow position: | chr22:6332951-6333399 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 139 |
Conread position: | 7-449 |
Cow position: | chr22:36860298-36859858 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 7-449 |
Cow position: | chr22:37292434-37291987 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 9-234 |
Cow position: | chr22:38550640-38550862 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 179 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 105, 11 |
Conread position: | 9-307 |
Cow position: | chr22:44458195-44458496 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 10 |
Conread position: | 9-402 |
Cow position: | chr22:45582164-45582553 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 11 |
Conread position: | 9-414 |
Cow position: | chr22:44606435-44606046 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 274 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 30, 11 |
Conread position: | 9-435 |
Cow position: | chr22:290450-290026 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 11 |
Conread position: | 9-444 |
Cow position: | chr22:44935218-44935648 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 10 |
Conread position: | 9-449 |
Cow position: | chr22:17327213-17326767 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 30 |
Conread position: | 10-447 |
Cow position: | chr22:15852671-15853111 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 132 |
Conread position: | 10-449 |
Cow position: | chr22:39468264-39467827 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 26 |
Conread position: | 13-431 |
Cow position: | chr22:10304074-10303670 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 273 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 166, 18 |
Conread position: | 14-430 |
Cow position: | chr22:41241477-41241901 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 127 |
Conread position: | 17-165 |
Cow position: | chr22:24537012-24537163 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 47, 127 |
Conread position: | 17-445 |
Cow position: | chr22:296707-297136 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 88 |
Conread position: | 17-447 |
Cow position: | chr22:21035135-21034701 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 23 |
Conread position: | 18-449 |
Cow position: | chr22:44397688-44398120 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 62 |
Conread position: | 20-174 |
Cow position: | chr22:13575879-13575723 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 8 |
Conread position: | 23-449 |
Cow position: | chr22:21590678-21591113 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 124 |
Conread position: | 24-447 |
Cow position: | chr22:3803444-3803869 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 16 |
Conread position: | 28-376 |
Cow position: | chr22:45510275-45509934 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 242 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 89, 8 |
Conread position: | 28-390 |
Cow position: | chr22:13673546-13673189 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 120 |
Conread position: | 32-404 |
Cow position: | chr22:33954122-33954467 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 251 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 88, 31 |
Conread position: | 32-447 |
Cow position: | chr22:30128855-30129267 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 108 |
Conread position: | 32-447 |
Cow position: | chr22:30146504-30146916 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 108 |
Conread position: | 35-448 |
Cow position: | chr22:19585718-19585305 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 117 |
Conread position: | 36-432 |
Cow position: | chr22:44518358-44517968 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 66 |
Conread position: | 37-339 |
Cow position: | chr22:283811-283532 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 201 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 44-251 |
Cow position: | chr22:4066260-4066055 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 131, 68 |
Conread position: | 45-445 |
Cow position: | chr22:13766649-13767045 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 16 |
Conread position: | 53-373 |
Cow position: | chr22:36185047-36185368 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 90 |
Conread position: | 55-367 |
Cow position: | chr22:44478052-44478351 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 26 |
Conread position: | 85-315 |
Cow position: | chr22:9045595-9045824 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 165 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 30, 58 |
Conread position: | 88-328 |
Cow position: | chr22:44366781-44366537 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 55 |
Conread position: | 90-447 |
Cow position: | chr22:30677387-30677025 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 53 |
Conread position: | 95-299 |
Cow position: | chr22:40370813-40371011 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 159 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 17, 12 |
Conread position: | 104-411 |
Cow position: | chr22:36270520-36270832 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 221 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 76, 36 |
Conread position: | 137-348 |
Cow position: | chr22:15310564-15310350 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 143-405 |
Cow position: | chr22:36276960-36277230 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 37, 84 |
Conread position: | 144-449 |
Cow position: | chr22:45014734-45015035 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 40 |
Show alignments to all cow chromosomes.