Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 121
               

               Conread position:
               4-441
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-279
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-352
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               5-405
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-426
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-453
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               6-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               7-333
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 141
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               9-173
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               10-448
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               16-435
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               16-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               23-328
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               23-417
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               23-448
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               24-397
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               24-448
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               25-449
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               25-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               27-444
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               30-247
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               37-373
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               53-354
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 59
               

               Conread position:
               72-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               309, 53
               

               Conread position:
               93-449
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               103-445
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               116-449
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               
Show alignments to all cow chromosomes.