Cow genome map
| Conread name: | Emb1-C0005218_C12 |
| Conread position: | 1-165 |
| Cow position: | chr24:36558450-36558289 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 1-179 |
| Cow position: | chr24:1450736-1450909 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 1-435 |
| Cow position: | chr24:38638850-38639281 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 1-444 |
| Cow position: | chr24:14871008-14870563 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 1-447 |
| Cow position: | chr24:6023764-6023314 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 3-276 |
| Cow position: | chr24:35840747-35840482 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 3-416 |
| Cow position: | chr24:17322029-17322434 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 3-445 |
| Cow position: | chr24:8606143-8606593 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 4-345 |
| Cow position: | chr24:14389211-14388872 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 4-445 |
| Cow position: | chr24:35869242-35868812 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 5-296 |
| Cow position: | chr24:25437618-25437902 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 5-346 |
| Cow position: | chr24:12699501-12699150 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 5-375 |
| Cow position: | chr24:6435806-6436186 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-400 |
| Cow position: | chr24:16097850-16098244 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 5-435 |
| Cow position: | chr24:7062865-7063303 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 146 |
| Conread position: | 5-447 |
| Cow position: | chr24:6324027-6323576 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 5-447 |
| Cow position: | chr24:44018831-44019283 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 5-448 |
| Cow position: | chr24:6337712-6338157 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 7-434 |
| Cow position: | chr24:14383308-14382867 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-441 |
| Cow position: | chr24:29188618-29189055 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 7-447 |
| Cow position: | chr24:33934714-33935162 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 7-449 |
| Cow position: | chr24:12087534-12087976 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 9-364 |
| Cow position: | chr24:6142416-6142761 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 9-447 |
| Cow position: | chr24:6659165-6658720 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 9-449 |
| Cow position: | chr24:12238623-12239067 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 9-449 |
| Cow position: | chr24:13179686-13179245 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 9-449 |
| Cow position: | chr24:38585791-38585359 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 10-395 |
| Cow position: | chr24:6344276-6344648 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 10-449 |
| Cow position: | chr24:16560984-16560534 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 10-449 |
| Cow position: | chr24:19834737-19835183 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 17-173 |
| Cow position: | chr24:19641016-19641182 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 17-179 |
| Cow position: | chr24:10222831-10222670 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 17-412 |
| Cow position: | chr24:6407373-6407772 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 19-447 |
| Cow position: | chr24:13189527-13189938 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 23-445 |
| Cow position: | chr24:310211-310639 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 23-448 |
| Cow position: | chr24:147264-146836 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 23-449 |
| Cow position: | chr24:12127769-12127334 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 25-300 |
| Cow position: | chr24:14277865-14277601 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 25-420 |
| Cow position: | chr24:12149960-12149548 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 26-449 |
| Cow position: | chr24:12204993-12204567 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 27-360 |
| Cow position: | chr24:16083429-16083093 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 28-444 |
| Cow position: | chr24:6353484-6353907 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 28-449 |
| Cow position: | chr24:7089623-7089224 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 34-441 |
| Cow position: | chr24:12334373-12333971 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 34-447 |
| Cow position: | chr24:4044892-4044480 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 37-417 |
| Cow position: | chr24:17279025-17278643 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 38-447 |
| Cow position: | chr24:13044267-13043853 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 56-287 |
| Cow position: | chr24:40468431-40468662 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 74-449 |
| Cow position: | chr24:14755395-14755775 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 92-432 |
| Cow position: | chr24:6676000-6676342 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 96-431 |
| Cow position: | chr24:36723249-36723586 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 112-432 |
| Cow position: | chr24:5776961-5776648 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 251, 28 |
| Conread position: | 123-449 |
| Cow position: | chr24:6036438-6036765 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 14 |
Show alignments to all cow chromosomes.