Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               3-416
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               3-445
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               4-445
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               5-346
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               5-375
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-400
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               7-434
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               9-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               10-395
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               17-173
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               17-179
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               17-412
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               19-447
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               23-445
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               23-448
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 121
               

               Conread position:
               25-300
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               25-420
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               27-360
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 85
               

               Conread position:
               34-441
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               34-447
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               37-417
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               77, 106
               

               Conread position:
               38-447
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 105
               

               Conread position:
               56-287
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               74-449
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               92-432
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               96-431
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               112-432
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               251, 28
               

               Conread position:
               123-449
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 14
               
Show alignments to all cow chromosomes.