Cow genome map
| Conread name: | Emb1-C0005218_C12 |
| Conread position: | 1-402 |
| Cow position: | chr25:30266771-30267182 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 1-444 |
| Cow position: | chr25:27523319-27522892 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 1-450 |
| Cow position: | chr25:18486275-18485827 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 2-435 |
| Cow position: | chr25:11931502-11931070 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 4-281 |
| Cow position: | chr25:18182995-18183264 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 4-435 |
| Cow position: | chr25:13693384-13692943 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 4-447 |
| Cow position: | chr25:22148821-22149278 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 5-347 |
| Cow position: | chr25:17655726-17656058 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 5-355 |
| Cow position: | chr25:18192475-18192115 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-360 |
| Cow position: | chr25:20774086-20773721 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 5-435 |
| Cow position: | chr25:11041652-11042072 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 5-441 |
| Cow position: | chr25:18273486-18273054 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 143 |
| Conread position: | 5-445 |
| Cow position: | chr25:18177980-18178418 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 5-445 |
| Cow position: | chr25:18305424-18305872 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 5-447 |
| Cow position: | chr25:13062424-13061973 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 5-447 |
| Cow position: | chr25:17588271-17587831 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 6-175 |
| Cow position: | chr25:39461664-39461493 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 6-366 |
| Cow position: | chr25:25543205-25543564 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 6-447 |
| Cow position: | chr25:27021304-27020861 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 7-177 |
| Cow position: | chr25:24658925-24658749 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 7-445 |
| Cow position: | chr25:34345716-34345269 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 7-449 |
| Cow position: | chr25:18888454-18888005 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 7-449 |
| Cow position: | chr25:25507990-25508446 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 9-246 |
| Cow position: | chr25:18325479-18325247 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 9-334 |
| Cow position: | chr25:14957155-14956840 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 9-401 |
| Cow position: | chr25:11830813-11830420 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 9-435 |
| Cow position: | chr25:12757836-12757397 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 9-449 |
| Cow position: | chr25:20630919-20631363 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 9-450 |
| Cow position: | chr25:17559270-17558825 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 16-448 |
| Cow position: | chr25:12941372-12940935 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 16-450 |
| Cow position: | chr25:18251616-18251197 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 20 |
| Conread position: | 17-449 |
| Cow position: | chr25:13782336-13782786 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 18-164 |
| Cow position: | chr25:34676729-34676584 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 20-431 |
| Cow position: | chr25:4533195-4532787 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 22-435 |
| Cow position: | chr25:19339292-19338875 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 24-450 |
| Cow position: | chr25:24216163-24215757 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 288 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 203, 9 |
| Conread position: | 28-408 |
| Cow position: | chr25:13999072-13999450 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 12, 190 |
| Conread position: | 28-427 |
| Cow position: | chr25:21545272-21545674 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 28-451 |
| Cow position: | chr25:10944260-10943846 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 160, 8 |
| Conread position: | 29-404 |
| Cow position: | chr25:26732297-26732666 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 71-447 |
| Cow position: | chr25:20346625-20346246 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 85-287 |
| Cow position: | chr25:33614217-33614424 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 105-449 |
| Cow position: | chr25:16925011-16924664 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 143-435 |
| Cow position: | chr25:32580952-32581247 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.