Cow genome map
| Conread name: | Emb1-C0005218_C12 |
| Conread position: | 1-168 |
| Cow position: | chr27:16264592-16264760 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 1-239 |
| Cow position: | chr27:11486535-11486779 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 1-240 |
| Cow position: | chr27:16425961-16426206 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 1-434 |
| Cow position: | chr27:15274832-15274391 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 1-445 |
| Cow position: | chr27:25084813-25085240 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 1-449 |
| Cow position: | chr27:8735417-8735862 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 4-449 |
| Cow position: | chr27:9991960-9991524 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 5-173 |
| Cow position: | chr27:16552112-16552277 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 5-318 |
| Cow position: | chr27:27415099-27415396 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 5-351 |
| Cow position: | chr27:23292516-23292848 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 5-435 |
| Cow position: | chr27:798329-797889 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 6-408 |
| Cow position: | chr27:7419971-7420376 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 7-449 |
| Cow position: | chr27:9330974-9331426 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 7-449 |
| Cow position: | chr27:15636104-15635651 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 9-448 |
| Cow position: | chr27:25803443-25803005 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 10-444 |
| Cow position: | chr27:12748285-12748723 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 11-449 |
| Cow position: | chr27:3234277-3233830 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 17-449 |
| Cow position: | chr27:4980625-4981064 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 17-449 |
| Cow position: | chr27:26554148-26553749 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 23-433 |
| Cow position: | chr27:1677310-1676896 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 23-449 |
| Cow position: | chr27:26326328-26326753 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 24-408 |
| Cow position: | chr27:16611701-16611321 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 28-346 |
| Cow position: | chr27:1575860-1576187 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 28-443 |
| Cow position: | chr27:21335198-21335621 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 30-406 |
| Cow position: | chr27:22150211-22150590 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 32-432 |
| Cow position: | chr27:30911502-30911904 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 36-404 |
| Cow position: | chr27:22034539-22034890 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 38-445 |
| Cow position: | chr27:17818103-17818506 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 76, 6 |
| Conread position: | 38-449 |
| Cow position: | chr27:28079697-28080099 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 102 |
| Conread position: | 40-449 |
| Cow position: | chr27:13898593-13899003 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 103 |
| Conread position: | 56-447 |
| Cow position: | chr27:167632-167238 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 56-449 |
| Cow position: | chr27:19524848-19525237 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 103-435 |
| Cow position: | chr27:8199151-8199486 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 123-447 |
| Cow position: | chr27:29056524-29056850 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 140-401 |
| Cow position: | chr27:27194978-27194712 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 56 |
Show alignments to all cow chromosomes.