Cow genome map

Conread name: Emb1-C0005218_C12

Conread position: 1-138
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 37

Conread position: 1-445
Cow position:
Alignm length: 453
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 2-435
Cow position:
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 3-447
Cow position:
Alignm length: 457
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 3-449
Cow position:
Alignm length: 461
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 4-398
Cow position:
Alignm length: 404
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 4-449
Cow position:
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 4-449
Cow position:
Alignm length: 453
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 5-179
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 38

Conread position: 5-381
Cow position:
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 142

Conread position: 5-394
Cow position:
Alignm length: 395
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 5-426
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 186

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-444
Cow position:
Alignm length: 446
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 5-447
Cow position:
Alignm length: 454
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 146

Conread position: 5-447
Cow position:
Alignm length: 467
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 5-447
Cow position:
Alignm length: 464
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 5-450
Cow position:
Alignm length: 459
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 6-407
Cow position:
Alignm length: 407
Alignm identity: 262
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 30

Conread position: 7-435
Cow position:
Alignm length: 436
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 7-446
Cow position:
Alignm length: 456
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 7-447
Cow position:
Alignm length: 452
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 7-448
Cow position:
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 7-448
Cow position:
Alignm length: 451
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 7-449
Cow position:
Alignm length: 449
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 7-449
Cow position:
Alignm length: 451
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 105

Conread position: 7-449
Cow position:
Alignm length: 456
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 143

Conread position: 7-449
Cow position:
Alignm length: 454
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 7-449
Cow position:
Alignm length: 451
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 7-449
Cow position:
Alignm length: 456
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 7-449
Cow position:
Alignm length: 450
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-449
Cow position:
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 31

Conread position: 8-312
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 12

Conread position: 8-445
Cow position:
Alignm length: 447
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 31

Conread position: 9-432
Cow position:
Alignm length: 431
Alignm identity: 279
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 73, 19

Conread position: 9-447
Cow position:
Alignm length: 446
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 10-441
Cow position:
Alignm length: 437
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 10

Conread position: 10-447
Cow position:
Alignm length: 446
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 12-427
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 14-355
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 79

Conread position: 16-312
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 17-383
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 17-405
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 104

Conread position: 17-435
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 17-449
Cow position:
Alignm length: 441
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 128

Conread position: 20-299
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 35

Conread position: 23-400
Cow position:
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 18

Conread position: 23-447
Cow position:
Alignm length: 430
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 13

Conread position: 23-449
Cow position:
Alignm length: 432
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 23-450
Cow position:
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 28-342
Cow position:
Alignm length: 318
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 62

Conread position: 28-352
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 8

Conread position: 32-249
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 28

Conread position: 32-447
Cow position:
Alignm length: 424
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 111

Conread position: 37-389
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 75

Conread position: 38-399
Cow position:
Alignm length: 373
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 105

Conread position: 38-449
Cow position:
Alignm length: 418
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 90

Conread position: 38-449
Cow position:
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 104

Conread position: 44-179
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 106

Conread position: 53-449
Cow position:
Alignm length: 400
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 6

Conread position: 55-448
Cow position:
Alignm length: 405
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 88

Conread position: 67-450
Cow position:
Alignm length: 391
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 22

Conread position: 67-450
Cow position:
Alignm length: 391
Alignm identity: 254
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 5, 22

Conread position: 75-449
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 95-449
Cow position:
Alignm length: 359
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 48

Show alignments to all cow chromosomes.