Cow genome map

Conread name: Emb1-C0005218_C12

Conread position: 1-123
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 38

Conread position: 1-172
Cow position:
Alignm length: 181
Alignm identity: 147
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 22, 148

Conread position: 1-244
Cow position:
Alignm length: 254
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 1-431
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 89

Conread position: 1-434
Cow position:
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 1-441
Cow position:
Alignm length: 450
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 1-447
Cow position:
Alignm length: 466
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 2-395
Cow position:
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-445
Cow position:
Alignm length: 447
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 3-420
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 8

Conread position: 3-450
Cow position:
Alignm length: 457
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 4-247
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 35

Conread position: 4-281
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 144

Conread position: 4-441
Cow position:
Alignm length: 441
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 4-449
Cow position:
Alignm length: 458
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 4-449
Cow position:
Alignm length: 450
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 4-449
Cow position:
Alignm length: 456
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 145

Conread position: 5-135
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 112

Conread position: 5-146
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 5-146
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 38

Conread position: 5-177
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 34

Conread position: 5-201
Cow position:
Alignm length: 203
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 38

Conread position: 5-215
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 34

Conread position: 5-359
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 5-399
Cow position:
Alignm length: 410
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 81

Conread position: 5-407
Cow position:
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-407
Cow position:
Alignm length: 409
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-410
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 5-418
Cow position:
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 5-419
Cow position:
Alignm length: 427
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-433
Cow position:
Alignm length: 441
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-434
Cow position:
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 5-435
Cow position:
Alignm length: 442
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 444
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 451
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-435
Cow position:
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 5-441
Cow position:
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 5-444
Cow position:
Alignm length: 452
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-444
Cow position:
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 5-445
Cow position:
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 469
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 145

Conread position: 5-447
Cow position:
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 114

Conread position: 5-447
Cow position:
Alignm length: 455
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 5-447
Cow position:
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 5-447
Cow position:
Alignm length: 454
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 146

Conread position: 5-449
Cow position:
Alignm length: 457
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 5-449
Cow position:
Alignm length: 454
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 104

Conread position: 5-449
Cow position:
Alignm length: 453
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 66

Conread position: 5-449
Cow position:
Alignm length: 455
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 5-449
Cow position:
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-449
Cow position:
Alignm length: 453
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 6-179
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 76

Conread position: 6-431
Cow position:
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 14

Conread position: 6-435
Cow position:
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 7-215
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 66

Conread position: 7-307
Cow position:
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 7-408
Cow position:
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 15

Conread position: 7-443
Cow position:
Alignm length: 443
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 59

Conread position: 7-448
Cow position:
Alignm length: 451
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 7-449
Cow position:
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 140

Conread position: 7-449
Cow position:
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 7-449
Cow position:
Alignm length: 461
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 7-449
Cow position:
Alignm length: 454
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 7-449
Cow position:
Alignm length: 468
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 7-449
Cow position:
Alignm length: 459
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 145

Conread position: 7-449
Cow position:
Alignm length: 453
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 143

Conread position: 7-449
Cow position:
Alignm length: 459
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 138

Conread position: 7-449
Cow position:
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 7-449
Cow position:
Alignm length: 450
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 8-447
Cow position:
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 9-157
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 11

Conread position: 9-297
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 9-355
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 10

Conread position: 11-371
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 23

Conread position: 11-447
Cow position:
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 134

Conread position: 12-435
Cow position:
Alignm length: 435
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 24

Conread position: 17-276
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 43

Conread position: 17-435
Cow position:
Alignm length: 427
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 17-435
Cow position:
Alignm length: 428
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 17-444
Cow position:
Alignm length: 439
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 17-446
Cow position:
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 17-449
Cow position:
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 18-303
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 96, 22

Conread position: 18-435
Cow position:
Alignm length: 425
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 19-324
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 71, 9

Conread position: 20-449
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 22-213
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 50

Conread position: 23-346
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 23-432
Cow position:
Alignm length: 417
Alignm identity: 277
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 65

Conread position: 23-445
Cow position:
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 24-276
Cow position:
Alignm length: 264
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 122

Conread position: 24-411
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 45

Conread position: 25-363
Cow position:
Alignm length: 345
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 6

Conread position: 26-391
Cow position:
Alignm length: 371
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 8

Conread position: 28-397
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 115

Conread position: 28-411
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 359

Conread position: 28-445
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 29-178
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 42

Conread position: 29-447
Cow position:
Alignm length: 426
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 7

Conread position: 36-242
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 167, 79

Conread position: 38-230
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 106

Conread position: 38-449
Cow position:
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 38-449
Cow position:
Alignm length: 418
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 104

Conread position: 44-449
Cow position:
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 99

Conread position: 55-449
Cow position:
Alignm length: 398
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 88

Conread position: 67-447
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 207

Conread position: 70-432
Cow position:
Alignm length: 368
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 43

Conread position: 74-434
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 103, 66

Conread position: 79-417
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 85-406
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 50

Conread position: 89-447
Cow position:
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 113-445
Cow position:
Alignm length: 344
Alignm identity: 225
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 29

Conread position: 115-445
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 117-395
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.