Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               3-281
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               4-435
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 126
               

               Conread position:
               5-204
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               5-406
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-415
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 145
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               7-441
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 140
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               8-304
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               8-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               8-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               8-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               8-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               10-444
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               15-449
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               16-435
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               17-435
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               18-435
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               20-404
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               259, 8
               

               Conread position:
               22-179
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 119
               

               Conread position:
               23-435
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               23-446
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               24-414
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               25-356
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               27-272
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               28-286
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               28-414
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               146, 51
               

               Conread position:
               28-417
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               28-430
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               29-443
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               10, 119
               

               Conread position:
               34-444
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               36-447
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               37-449
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 108
               

               Conread position:
               38-402
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               39-447
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               47-189
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               53-447
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               58-448
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 85
               

               Conread position:
               60-435
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 84
               

               Conread position:
               61-402
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 88
               

               Conread position:
               65-449
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               74-435
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               74-445
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               74-450
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               81-411
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               309, 35
               

               Conread position:
               81-411
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 7
               
Show alignments to all cow chromosomes.