Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 21
               

               Conread position:
               2-179
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               3-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               4-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               5-168
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               5-228
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-317
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               5-404
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               5-408
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-411
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 143
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               7-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-179
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-247
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-306
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               268, 21
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               7-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 141
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               8-404
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               9-172
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               9-177
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               9-399
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               9-450
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               17-177
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 131
               

               Conread position:
               17-419
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               17-435
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 124
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 19
               

               Conread position:
               21-447
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 20
               

               Conread position:
               23-258
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               23-261
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               157, 74
               

               Conread position:
               23-433
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               23-445
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               25-446
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               27-375
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               27-447
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               28-280
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 7
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               32-407
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               34-391
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               36-447
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               209, 25
               

               Conread position:
               38-385
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               45-450
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               55-292
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               55-448
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 71
               

               Conread position:
               72-257
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               74-445
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               85-447
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               95-435
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               103-449
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               116-449
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               135-449
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 32
               
Show alignments to all cow chromosomes.