Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               3-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               4-402
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               4-450
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 155
               

               Conread position:
               5-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-179
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               5-201
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               5-375
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-419
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 113
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               6-356
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               6-432
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 136
               

               Conread position:
               6-444
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               6-449
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               7-269
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               7-315
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 102
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 21
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               9-387
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               10-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               14-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 191
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               16-450
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               17-179
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               17-414
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               18-407
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               20-179
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               20-279
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               22-428
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               23-433
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               23-444
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               23-445
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 52
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               34-173
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               34-408
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               36-411
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               36-445
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 105
               

               Conread position:
               36-447
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 17
               

               Conread position:
               38-242
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               38-449
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               49-449
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               64-449
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               72-450
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               95-433
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               105-411
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               116-337
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               116-435
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               118-435
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               120-445
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               120-447
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               130-435
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 13
               
Show alignments to all cow chromosomes.