Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 19
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               2-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               4-422
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               4-445
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-266
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               5-311
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               5-342
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               5-363
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 113
               

               Conread position:
               5-444
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 140
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 23
               

               Conread position:
               6-310
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 14
               

               Conread position:
               7-256
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               8-393
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               9-138
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               9-412
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 26
               

               Conread position:
               10-450
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               11-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 134
               

               Conread position:
               16-449
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 20
               

               Conread position:
               17-173
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               17-338
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 23
               

               Conread position:
               17-410
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               17-411
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 19
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               17-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               20-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               23-435
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 13
               

               Conread position:
               25-434
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               25-449
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               26-449
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               27-447
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 121
               

               Conread position:
               28-422
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               28-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               33-364
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               36-290
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 107
               

               Conread position:
               37-449
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               38-417
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 101
               

               Conread position:
               38-453
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 92
               

               Conread position:
               39-402
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               40-441
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               44-449
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               44-449
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               48-202
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               70, 95
               

               Conread position:
               50-435
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               54-447
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               91-435
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               93-306
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               95-346
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               97-366
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               104-431
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               111-449
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               133-449
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               140-450
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               144-435
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               146-413
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               261-447
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 49
               
Show alignments to all cow chromosomes.