Cow genome map


           Conread name:
           Emb1-C0005218_C12
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               2-300
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               3-338
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 114
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 145
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 40
               

               Conread position:
               4-341
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               5-162
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               5-257
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               5-430
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 249
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 143
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               5-449
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               7-152
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               7-153
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               7-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 141
               

               Conread position:
               7-406
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-448
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-450
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               8-412
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               8-416
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               8-445
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               9-179
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               9-448
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               9-449
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               10-449
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               14-445
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               16-173
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               16-449
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               17-314
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               17-356
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 14
               

               Conread position:
               17-433
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               17-434
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               17-444
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               17-450
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               20-431
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               23-447
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               23-447
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               23-449
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               24-305
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               24-447
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               156, 46
               

               Conread position:
               25-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               27-447
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               28-405
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               16, 66
               

               Conread position:
               28-448
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               376, 8
               

               Conread position:
               34-449
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               34-449
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               37-445
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               38-405
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               138, 14
               

               Conread position:
               38-414
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               38-433
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 106
               

               Conread position:
               67-348
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               79-405
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               81-449
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               92-447
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               105-435
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               111-430
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               252-451
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.