Cow genome map
Conread name: | Emb1-C0005218_C12 |
Conread position: | 1-164 |
Cow position: | chr9:3372186-3372024 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 133 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 17, 120 |
Conread position: | 1-417 |
Cow position: | chr9:4666310-4666736 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 20 |
Conread position: | 1-449 |
Cow position: | chr9:44819276-44819725 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 95 |
Conread position: | 2-300 |
Cow position: | chr9:4649477-4649167 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 221 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 16, 37 |
Conread position: | 3-338 |
Cow position: | chr9:3005107-3004766 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 114 |
Conread position: | 3-435 |
Cow position: | chr9:2679400-2679837 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 145 |
Conread position: | 4-206 |
Cow position: | chr9:16176897-16177102 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 115, 40 |
Conread position: | 4-341 |
Cow position: | chr9:26553719-26554038 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 39 |
Conread position: | 4-449 |
Cow position: | chr9:1995253-1994818 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 145 |
Conread position: | 4-449 |
Cow position: | chr9:21410434-21410894 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 145 |
Conread position: | 4-449 |
Cow position: | chr9:35594938-35594492 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 14 |
Conread position: | 5-162 |
Cow position: | chr9:8283937-8283772 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 5-257 |
Cow position: | chr9:46859324-46859062 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 190 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 13, 146 |
Conread position: | 5-430 |
Cow position: | chr9:47043094-47043530 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-431 |
Cow position: | chr9:59428144-59428571 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-432 |
Cow position: | chr9:1638001-1638422 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 5-433 |
Cow position: | chr9:50791848-50792288 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 144 |
Conread position: | 5-435 |
Cow position: | chr9:25034426-25033986 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 144 |
Conread position: | 5-435 |
Cow position: | chr9:25903643-25904096 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 249 |
Conread position: | 5-435 |
Cow position: | chr9:28679110-28679540 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-441 |
Cow position: | chr9:827970-827529 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 143 |
Conread position: | 5-445 |
Cow position: | chr9:13474640-13474191 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 145 |
Conread position: | 5-445 |
Cow position: | chr9:20176576-20176139 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 312 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 12, 148 |
Conread position: | 5-447 |
Cow position: | chr9:221385-220951 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 5-447 |
Cow position: | chr9:3309759-3310201 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 5-447 |
Cow position: | chr9:26567740-26568182 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 92 |
Conread position: | 5-447 |
Cow position: | chr9:38677282-38677731 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 143 |
Conread position: | 5-448 |
Cow position: | chr9:50698437-50698881 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 134 |
Conread position: | 5-449 |
Cow position: | chr9:650889-650436 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 143 |
Conread position: | 5-450 |
Cow position: | chr9:4942674-4942218 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 6-433 |
Cow position: | chr9:17063247-17062811 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 7-152 |
Cow position: | chr9:26736893-26737044 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 11, 137 |
Conread position: | 7-153 |
Cow position: | chr9:22432632-22432773 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 7-177 |
Cow position: | chr9:10322941-10323118 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 11, 141 |
Conread position: | 7-406 |
Cow position: | chr9:22654716-22655124 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 138 |
Conread position: | 7-418 |
Cow position: | chr9:10937735-10938150 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 32 |
Conread position: | 7-448 |
Cow position: | chr9:5141842-5142285 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 7-448 |
Cow position: | chr9:30673515-30673967 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 143 |
Conread position: | 7-448 |
Cow position: | chr9:32970091-32970530 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 44 |
Conread position: | 7-449 |
Cow position: | chr9:4533631-4534082 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 114 |
Conread position: | 7-449 |
Cow position: | chr9:6250438-6250873 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 73 |
Conread position: | 7-449 |
Cow position: | chr9:17304837-17304387 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 32 |
Conread position: | 7-449 |
Cow position: | chr9:18508682-18508237 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 7-450 |
Cow position: | chr9:7060943-7060475 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 145 |
Conread position: | 8-355 |
Cow position: | chr9:59481655-59481314 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 31 |
Conread position: | 8-412 |
Cow position: | chr9:29627616-29627199 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 143 |
Conread position: | 8-416 |
Cow position: | chr9:8165730-8165339 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 8-445 |
Cow position: | chr9:42310818-42311263 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 45 |
Conread position: | 9-179 |
Cow position: | chr9:22089658-22089822 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 93, 10 |
Conread position: | 9-448 |
Cow position: | chr9:37161670-37161226 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 135 |
Conread position: | 9-449 |
Cow position: | chr9:25188248-25188679 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 11 |
Conread position: | 10-449 |
Cow position: | chr9:31808732-31809164 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 14-445 |
Cow position: | chr9:35315741-35315287 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 52 |
Conread position: | 16-173 |
Cow position: | chr9:18211405-18211561 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 130 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 24, 101 |
Conread position: | 16-447 |
Cow position: | chr9:2210912-2211353 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 16-449 |
Cow position: | chr9:37970055-37969620 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 53 |
Conread position: | 17-314 |
Cow position: | chr9:2497825-2497521 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 128 |
Conread position: | 17-356 |
Cow position: | chr9:49303510-49303181 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 88, 14 |
Conread position: | 17-433 |
Cow position: | chr9:2871479-2871905 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 18 |
Conread position: | 17-434 |
Cow position: | chr9:17901410-17901001 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 23 |
Conread position: | 17-444 |
Cow position: | chr9:7003883-7004317 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 19 |
Conread position: | 17-447 |
Cow position: | chr9:20939472-20939897 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 51 |
Conread position: | 17-450 |
Cow position: | chr9:30827890-30828331 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 130 |
Conread position: | 20-431 |
Cow position: | chr9:6977487-6977889 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 54 |
Conread position: | 23-447 |
Cow position: | chr9:4283133-4283546 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 13 |
Conread position: | 23-447 |
Cow position: | chr9:45874683-45875104 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 86 |
Conread position: | 23-449 |
Cow position: | chr9:2172109-2172531 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 10 |
Conread position: | 24-305 |
Cow position: | chr9:29027052-29026762 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 123 |
Conread position: | 24-447 |
Cow position: | chr9:46460891-46460482 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 278 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 156, 46 |
Conread position: | 25-244 |
Cow position: | chr9:3544043-3544269 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 174 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 94, 11 |
Conread position: | 27-447 |
Cow position: | chr9:50094077-50093650 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 118 |
Conread position: | 28-405 |
Cow position: | chr9:34724675-34725052 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 261 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 28-448 |
Cow position: | chr9:8402542-8402942 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 376, 8 |
Conread position: | 34-449 |
Cow position: | chr9:5005155-5005574 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 15 |
Conread position: | 34-449 |
Cow position: | chr9:27036083-27036489 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 26 |
Conread position: | 37-445 |
Cow position: | chr9:12912952-12913362 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 18 |
Conread position: | 38-405 |
Cow position: | chr9:56807198-56806834 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 242 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 138, 14 |
Conread position: | 38-414 |
Cow position: | chr9:49515303-49514929 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 247 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 77, 23 |
Conread position: | 38-433 |
Cow position: | chr9:46272297-46272698 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 263 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 70, 106 |
Conread position: | 67-348 |
Cow position: | chr9:8781706-8781422 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 18 |
Conread position: | 71-435 |
Cow position: | chr9:64015463-64015097 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 14 |
Conread position: | 79-405 |
Cow position: | chr9:26761802-26761492 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 215 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 20 |
Conread position: | 81-449 |
Cow position: | chr9:26083355-26082970 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 64 |
Conread position: | 92-447 |
Cow position: | chr9:47545428-47545779 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 50 |
Conread position: | 105-435 |
Cow position: | chr9:29332494-29332821 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 227 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 111-430 |
Cow position: | chr9:26737164-26737477 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 8 |
Conread position: | 252-451 |
Cow position: | chr9:54681354-54681156 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 158 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.