Cow genome map


           Conread name:
           End1-UMC-pd10en2-001-b01
        

               Conread position:
               4-280
               

               Cow position:
               chr25:8015128-8015425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               51, 120
               

               Conread position:
               4-281
               

               Cow position:
               chr25:27977854-27977572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               4-286
               

               Cow position:
               chr25:13241579-13241858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               8-277
               

               Cow position:
               chr25:37231630-37231361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 232
               

               Conread position:
               13-286
               

               Cow position:
               chr25:25731520-25731797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               62, 145
               

               Conread position:
               22-277
               

               Cow position:
               chr25:16523066-16523327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               189, 88
               

               Conread position:
               22-286
               

               Cow position:
               chr25:20369093-20369359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 103
               

               Conread position:
               34-249
               

               Cow position:
               chr25:23895251-23895468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               41-245
               

               Cow position:
               chr25:33264492-33264701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               43-281
               

               Cow position:
               chr25:33459585-33459339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 118
               
Show alignments to all cow chromosomes.