Cow genome map

Conread name: End1-UMC-pd10en2-002-f05

Conread position: 1-162
Cow position: chr11:6154290-6154440 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 25

Conread position: 1-171
Cow position: chr11:42793095-42792932 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 63

Conread position: 1-176
Cow position: chr11:13191103-13191280 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 63

Conread position: 1-186
Cow position: chr11:21497399-21497578 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 80

Conread position: 1-199
Cow position: chr11:10620447-10620259 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 129, 31

Conread position: 1-207
Cow position: chr11:82796408-82796212 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-214
Cow position: chr11:66425003-66424796 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 127, 71

Conread position: 1-216
Cow position: chr11:5344-5549 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 1-217
Cow position: chr11:6194083-6194293 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 210, 55

Conread position: 1-217
Cow position: chr11:23128665-23128453 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 129, 79

Conread position: 1-218
Cow position: chr11:64638651-64638438 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 109

Conread position: 1-220
Cow position: chr11:10213686-10213479 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1-223
Cow position: chr11:11646947-11647178 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 79

Conread position: 1-223
Cow position: chr11:20761724-20761935 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 1-223
Cow position: chr11:29947053-29946821 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 1-223
Cow position: chr11:35684617-35684408 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 1-223
Cow position: chr11:42358996-42359212 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 193, 28

Conread position: 1-223
Cow position: chr11:61454649-61454424 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 44

Conread position: 1-223
Cow position: chr11:86720534-86720325 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 211, 20

Conread position: 1-226
Cow position: chr11:47545008-47545226 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 69

Conread position: 1-230
Cow position: chr11:11232577-11232356 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 1-230
Cow position: chr11:34032324-34032099 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 202, 71

Conread position: 1-230
Cow position: chr11:65767075-65767299 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 128, 77

Conread position: 1-232
Cow position: chr11:377766-377539 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 83

Conread position: 1-234
Cow position: chr11:14466610-14466383 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 130, 6

Conread position: 1-234
Cow position: chr11:23232638-23232416 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 81

Conread position: 1-234
Cow position: chr11:31506722-31506952 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 109

Conread position: 1-235
Cow position: chr11:45898175-45897944 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 129, 63

Conread position: 1-236
Cow position: chr11:33345321-33345551 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-236
Cow position: chr11:43898018-43898244 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 10

Conread position: 1-236
Cow position: chr11:61958867-61958639 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-237
Cow position: chr11:44575857-44575646 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-237
Cow position: chr11:71501254-71501025 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 228, 78

Conread position: 1-239
Cow position: chr11:80530246-80530467 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-240
Cow position: chr11:30787094-30787333 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 24

Conread position: 1-240
Cow position: chr11:48474581-48474813 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 1-240
Cow position: chr11:62155504-62155750 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 96

Conread position: 1-240
Cow position: chr11:83925928-83926152 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 1-241
Cow position: chr11:62151007-62150783 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 1-242
Cow position: chr11:1071215-1070977 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 76

Conread position: 1-242
Cow position: chr11:7590071-7590302 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 222, 78

Conread position: 1-242
Cow position: chr11:16907166-16906939 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 65

Conread position: 1-242
Cow position: chr11:33341269-33341032 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 77

Conread position: 1-242
Cow position: chr11:35153947-35153711 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 77

Conread position: 1-242
Cow position: chr11:40573455-40573224 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 83

Conread position: 1-242
Cow position: chr11:43430575-43430344 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 32

Conread position: 1-242
Cow position: chr11:48272075-48272312 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 107, 0

Conread position: 1-242
Cow position: chr11:63847726-63847962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 209, 76

Conread position: 1-242
Cow position: chr11:70086206-70086444 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 71

Conread position: 1-242
Cow position: chr11:70609664-70609910 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 79

Conread position: 1-242
Cow position: chr11:72375808-72375564 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 81

Conread position: 1-242
Cow position: chr11:73924682-73924449 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 10

Conread position: 1-243
Cow position: chr11:23586515-23586753 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 40

Conread position: 1-243
Cow position: chr11:32436211-32436447 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 22

Conread position: 1-243
Cow position: chr11:63482548-63482318 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 127, 71

Conread position: 1-244
Cow position: chr11:40478972-40478739 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 1-246
Cow position: chr11:28643962-28644205 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 226, 107

Conread position: 1-246
Cow position: chr11:30209944-30209705 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 12

Conread position: 1-246
Cow position: chr11:33310850-33311095 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 169, 80

Conread position: 1-249
Cow position: chr11:41293941-41293699 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 76

Conread position: 1-251
Cow position: chr11:46746506-46746758 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 12

Conread position: 1-254
Cow position: chr11:34829903-34829662 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 249, 22

Conread position: 1-256
Cow position: chr11:30954877-30955128 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 78

Conread position: 1-256
Cow position: chr11:54334211-54334456 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 226, 78

Conread position: 1-258
Cow position: chr11:65607813-65607557 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 242, 76

Conread position: 1-259
Cow position: chr11:7460737-7460486 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 211, 64

Conread position: 1-260
Cow position: chr11:34113141-34113400 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 88

Conread position: 1-264
Cow position: chr11:18706940-18706687 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 71

Conread position: 1-266
Cow position: chr11:4207190-4207460 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 203, 36

Conread position: 1-267
Cow position: chr11:4663168-4662909 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 223, 75

Conread position: 1-267
Cow position: chr11:9270848-9270589 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 127, 74

Conread position: 1-267
Cow position: chr11:20602107-20602363 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 127, 31

Conread position: 1-270
Cow position: chr11:8988351-8988088 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 80

Conread position: 1-272
Cow position: chr11:38874525-38874266 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-272
Cow position: chr11:65409277-65409021 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-273
Cow position: chr11:3393332-3393063 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 226, 31

Conread position: 1-273
Cow position: chr11:23138181-23137908 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 127, 57

Conread position: 1-274
Cow position: chr11:11125540-11125820 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 70

Conread position: 1-274
Cow position: chr11:26144218-26143942 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 224, 47

Conread position: 1-274
Cow position: chr11:27719445-27719190 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 108

Conread position: 1-274
Cow position: chr11:49934859-49934591 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 102

Conread position: 1-274
Cow position: chr11:63202369-63202095 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 159, 16

Conread position: 1-274
Cow position: chr11:64334735-64334985 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 165, 29

Conread position: 1-275
Cow position: chr11:80537364-80537625 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 1-277
Cow position: chr11:87155397-87155676 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 218, 69

Conread position: 1-278
Cow position: chr11:39499236-39499511 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 212, 19

Conread position: 1-279
Cow position: chr11:71492977-71492705 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 75

Conread position: 1-283
Cow position: chr11:2925410-2925146 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 226, 34

Conread position: 1-284
Cow position: chr11:42016755-42016475 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 221, 80

Conread position: 1-284
Cow position: chr11:63434178-63433904 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 44

Conread position: 1-285
Cow position: chr11:259295-259013 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 66

Conread position: 1-285
Cow position: chr11:28993854-28993584 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 128, 71

Conread position: 1-285
Cow position: chr11:36658943-36658670 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 77

Conread position: 1-285
Cow position: chr11:40608719-40608429 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 128, 65

Conread position: 1-285
Cow position: chr11:45434964-45435239 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 220, 31

Conread position: 1-285
Cow position: chr11:50472193-50472482 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 65

Conread position: 1-285
Cow position: chr11:62620261-62620540 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 22

Conread position: 1-285
Cow position: chr11:80923446-80923162 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 128, 80

Conread position: 1-286
Cow position: chr11:52690644-52690360 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 214, 76

Conread position: 1-286
Cow position: chr11:62239624-62239906 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 244, 31

Conread position: 1-287
Cow position: chr11:2084019-2084311 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 223, 84

Conread position: 1-287
Cow position: chr11:2907641-2907368 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 76

Conread position: 1-287
Cow position: chr11:8525233-8524952 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 238, 69

Conread position: 1-287
Cow position: chr11:13043266-13042982 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 224, 22

Conread position: 1-287
Cow position: chr11:13061352-13061088 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 44

Conread position: 1-287
Cow position: chr11:13592616-13592905 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 224, 16

Conread position: 1-287
Cow position: chr11:13864220-13863936 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 32

Conread position: 1-287
Cow position: chr11:14470248-14470527 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 226, 55

Conread position: 1-287
Cow position: chr11:15016919-15017224 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 1-287
Cow position: chr11:15772837-15772547 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 74

Conread position: 1-287
Cow position: chr11:17227768-17227485 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 129, 31

Conread position: 1-287
Cow position: chr11:18572679-18572949 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 279, 78

Conread position: 1-287
Cow position: chr11:21728391-21728123 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 142, 35

Conread position: 1-287
Cow position: chr11:23407339-23407626 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 107

Conread position: 1-287
Cow position: chr11:27248370-27248654 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 238, 86

Conread position: 1-287
Cow position: chr11:27746802-27747084 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 68

Conread position: 1-287
Cow position: chr11:27913153-27913452 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 34

Conread position: 1-287
Cow position: chr11:30708382-30708671 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 75

Conread position: 1-287
Cow position: chr11:33348306-33348033 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 223, 65

Conread position: 1-287
Cow position: chr11:35580135-35580427 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 229, 63

Conread position: 1-287
Cow position: chr11:36182564-36182857 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 71

Conread position: 1-287
Cow position: chr11:37804676-37804386 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 223, 26

Conread position: 1-287
Cow position: chr11:38334404-38334687 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 221, 44

Conread position: 1-287
Cow position: chr11:38638997-38639265 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 279, 51

Conread position: 1-287
Cow position: chr11:39462507-39462785 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 226, 32

Conread position: 1-287
Cow position: chr11:42066738-42067030 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 129, 31

Conread position: 1-287
Cow position: chr11:42083356-42083619 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 127, 15

Conread position: 1-287
Cow position: chr11:42296740-42296461 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 227, 78

Conread position: 1-287
Cow position: chr11:43360905-43360621 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 221, 80

Conread position: 1-287
Cow position: chr11:44222768-44223047 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 143, 25

Conread position: 1-287
Cow position: chr11:45872439-45872144 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 103

Conread position: 1-287
Cow position: chr11:46747986-46747693 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 49

Conread position: 1-287
Cow position: chr11:47772514-47772216 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 15

Conread position: 1-287
Cow position: chr11:47899157-47899416 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 279, 63

Conread position: 1-287
Cow position: chr11:49873010-49872721 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 78

Conread position: 1-287
Cow position: chr11:52380996-52380706 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 224, 77

Conread position: 1-287
Cow position: chr11:53778493-53778786 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 224, 82

Conread position: 1-287
Cow position: chr11:55494557-55494830 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 279, 40

Conread position: 1-287
Cow position: chr11:56821369-56821096 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 15

Conread position: 1-287
Cow position: chr11:62490310-62490587 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 106

Conread position: 1-287
Cow position: chr11:63469754-63470023 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 279, 31

Conread position: 1-287
Cow position: chr11:64044119-64044383 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 280, 70

Conread position: 1-287
Cow position: chr11:66041150-66041438 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 78

Conread position: 1-287
Cow position: chr11:67600660-67600944 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 76

Conread position: 1-287
Cow position: chr11:67615051-67614759 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 83

Conread position: 1-287
Cow position: chr11:68905197-68904922 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 277, 69

Conread position: 1-287
Cow position: chr11:69977855-69978131 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 231, 28

Conread position: 1-287
Cow position: chr11:70206201-70206481 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 222, 19

Conread position: 1-287
Cow position: chr11:70483981-70483685 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 90

Conread position: 1-287
Cow position: chr11:70756359-70756640 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 226, 54

Conread position: 1-287
Cow position: chr11:75874874-75874606 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 280, 54

Conread position: 1-287
Cow position: chr11:77319290-77319578 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 129, 76

Conread position: 1-287
Cow position: chr11:77705633-77705916 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 223, 76

Conread position: 1-287
Cow position: chr11:80556098-80556384 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 220, 98

Conread position: 1-287
Cow position: chr11:81135287-81135003 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 224, 31

Conread position: 1-287
Cow position: chr11:81143672-81143378 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 118, 63

Conread position: 1-287
Cow position: chr11:81168154-81167865 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 109

Conread position: 1-287
Cow position: chr11:83043486-83043201 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 220, 80

Conread position: 1-287
Cow position: chr11:83066372-83066658 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 221, 70

Conread position: 1-287
Cow position: chr11:83397783-83398073 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 216, 75

Conread position: 1-288
Cow position: chr11:4674569-4674277 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 70

Conread position: 1-288
Cow position: chr11:24601851-24602124 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 48

Conread position: 1-293
Cow position: chr11:18698755-18699042 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 128, 78

Conread position: 1-293
Cow position: chr11:39115371-39115645 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 127, 76

Conread position: 1-293
Cow position: chr11:49057280-49057555 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 78

Conread position: 1-293
Cow position: chr11:49152830-49153112 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 279, 16

Conread position: 1-293
Cow position: chr11:50152938-50152641 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 77

Conread position: 1-293
Cow position: chr11:62789006-62789299 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 89

Conread position: 1-294
Cow position: chr11:34646470-34646768 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 221, 19

Conread position: 1-298
Cow position: chr11:44636880-44636585 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 254, 97

Conread position: 1-300
Cow position: chr11:17493356-17493660 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 40

Conread position: 1-300
Cow position: chr11:65762722-65762403 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 76

Conread position: 1-300
Cow position: chr11:82940743-82940448 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 228, 19

Conread position: 1-302
Cow position: chr11:45646717-45646413 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 210, 76

Conread position: 1-303
Cow position: chr11:40818760-40818452 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 106

Conread position: 1-303
Cow position: chr11:71868726-71868423 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 219, 76

Conread position: 1-303
Cow position: chr11:85723580-85723875 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 190, 63

Conread position: 1-305
Cow position: chr11:18851796-18852085 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 217, 48

Conread position: 1-305
Cow position: chr11:21844255-21843956 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 131, 48

Conread position: 1-305
Cow position: chr11:38236121-38236432 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 59

Conread position: 1-305
Cow position: chr11:48659809-48660117 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 232, 107

Conread position: 1-305
Cow position: chr11:51729166-51729457 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 279, 31

Conread position: 1-306
Cow position: chr11:34962940-34963244 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 78

Conread position: 1-308
Cow position: chr11:8545134-8544826 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 9

Conread position: 1-308
Cow position: chr11:31352691-31352372 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 256

Conread position: 1-308
Cow position: chr11:68112387-68112072 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 107

Conread position: 1-311
Cow position: chr11:48544314-48544629 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 191, 26

Conread position: 1-312
Cow position: chr11:19247318-19247009 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 221, 51

Conread position: 1-312
Cow position: chr11:23251714-23251404 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 44

Conread position: 1-312
Cow position: chr11:23272122-23271812 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 26

Conread position: 1-312
Cow position: chr11:32254339-32254022 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 216, 12

Conread position: 1-312
Cow position: chr11:68913020-68913338 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 77

Conread position: 1-312
Cow position: chr11:71390686-71390381 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 100

Conread position: 1-312
Cow position: chr11:74316590-74316900 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 220, 77

Conread position: 1-312
Cow position: chr11:75480150-75479829 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 112

Conread position: 1-312
Cow position: chr11:84228834-84228528 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 33

Conread position: 1-312
Cow position: chr11:84385758-84385444 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 71

Conread position: 1-313
Cow position: chr11:3739831-3740159 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 219, 22

Conread position: 2-191
Cow position: chr11:24937542-24937726 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 2-199
Cow position: chr11:67550494-67550309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 2-217
Cow position: chr11:42836080-42835865 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 50

Conread position: 2-228
Cow position: chr11:50778252-50778464 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 2-241
Cow position: chr11:46580234-46580464 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 2-246
Cow position: chr11:71168710-71168477 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 2-256
Cow position: chr11:66572622-66572371 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 107

Conread position: 2-258
Cow position: chr11:59872810-59873059 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 180, 75

Conread position: 2-261
Cow position: chr11:11558046-11558310 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 99

Conread position: 2-272
Cow position: chr11:53462822-53463092 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 182, 80

Conread position: 2-284
Cow position: chr11:64077625-64077339 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 188, 75

Conread position: 2-287
Cow position: chr11:32055304-32055019 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 67

Conread position: 2-287
Cow position: chr11:32126490-32126782 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 190, 30

Conread position: 2-287
Cow position: chr11:42291954-42291674 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 188, 54

Conread position: 2-287
Cow position: chr11:45631883-45631614 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 278, 75

Conread position: 2-287
Cow position: chr11:47311106-47310818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 206, 76

Conread position: 2-287
Cow position: chr11:48295911-48296191 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 126, 61

Conread position: 2-287
Cow position: chr11:64009598-64009892 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 78

Conread position: 2-287
Cow position: chr11:73354175-73353901 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 62

Conread position: 2-300
Cow position: chr11:77745377-77745070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 62

Conread position: 2-302
Cow position: chr11:40395317-40395617 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 225, 48

Conread position: 2-302
Cow position: chr11:62225865-62226156 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 39

Conread position: 2-303
Cow position: chr11:30830737-30830433 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 2-305
Cow position: chr11:5485889-5486203 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 77

Conread position: 2-305
Cow position: chr11:6400191-6399877 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 90

Conread position: 2-311
Cow position: chr11:64104179-64103858 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 15

Conread position: 2-312
Cow position: chr11:5217587-5217266 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 15

Conread position: 2-312
Cow position: chr11:53773556-53773877 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 88

Conread position: 3-201
Cow position: chr11:69392436-69392633 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 77

Conread position: 3-215
Cow position: chr11:84490610-84490415 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 61

Conread position: 3-223
Cow position: chr11:80761499-80761285 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 209, 73

Conread position: 3-230
Cow position: chr11:1362596-1362368 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 74

Conread position: 3-236
Cow position: chr11:67747164-67747391 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 215, 76

Conread position: 3-241
Cow position: chr11:44036605-44036832 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 32

Conread position: 3-242
Cow position: chr11:69075788-69076022 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 3-265
Cow position: chr11:56187499-56187750 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 218, 32

Conread position: 3-271
Cow position: chr11:15338951-15339209 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 222, 33

Conread position: 3-271
Cow position: chr11:68206959-68206697 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 30

Conread position: 3-287
Cow position: chr11:1380562-1380843 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 217, 14

Conread position: 3-287
Cow position: chr11:6234000-6233712 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 221, 76

Conread position: 3-287
Cow position: chr11:41986163-41985882 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 222, 14

Conread position: 3-287
Cow position: chr11:44031882-44032172 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 34

Conread position: 3-287
Cow position: chr11:49148919-49149212 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 45

Conread position: 3-293
Cow position: chr11:2917706-2917421 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 73

Conread position: 3-297
Cow position: chr11:34121080-34121371 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 82, 40

Conread position: 3-308
Cow position: chr11:26275078-26274779 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 75

Conread position: 3-312
Cow position: chr11:19592111-19591802 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 79

Conread position: 4-246
Cow position: chr11:59702367-59702605 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 176, 25

Conread position: 4-287
Cow position: chr11:375335-375624 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 78

Conread position: 5-221
Cow position: chr11:261381-261177 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 5-240
Cow position: chr11:70836489-70836267 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 217, 28

Conread position: 5-287
Cow position: chr11:20238553-20238842 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 77, 94

Conread position: 5-287
Cow position: chr11:52297339-52297057 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 73

Conread position: 5-287
Cow position: chr11:83032565-83032843 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 214, 20

Conread position: 5-297
Cow position: chr11:48428988-48429292 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 187, 80

Conread position: 5-308
Cow position: chr11:35981262-35980954 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 40

Conread position: 6-287
Cow position: chr11:35347870-35347585 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 185, 65

Conread position: 6-287
Cow position: chr11:63999207-63998924 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 73

Conread position: 6-312
Cow position: chr11:63221222-63221529 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 134, 73

Conread position: 7-223
Cow position: chr11:25386947-25387161 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 71

Conread position: 7-287
Cow position: chr11:30728288-30728567 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 212, 28

Conread position: 7-312
Cow position: chr11:63435401-63435713 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 69

Conread position: 8-270
Cow position: chr11:30192059-30192329 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 61

Conread position: 8-279
Cow position: chr11:39060716-39060448 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 63

Conread position: 8-287
Cow position: chr11:8584205-8584481 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 55

Conread position: 9-287
Cow position: chr11:29960181-29960458 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 213, 98

Conread position: 9-287
Cow position: chr11:75285882-75285590 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 76

Conread position: 9-305
Cow position: chr11:55761756-55762039 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 271, 70

Conread position: 10-232
Cow position: chr11:44234239-44234457 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 71

Conread position: 10-242
Cow position: chr11:952154-952378 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 10-296
Cow position: chr11:81162548-81162272 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 270, 68

Conread position: 10-308
Cow position: chr11:31874979-31875281 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 210, 29

Conread position: 12-243
Cow position: chr11:26845706-26845482 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 210, 67

Conread position: 12-311
Cow position: chr11:67615358-67615059 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 117, 48

Conread position: 13-217
Cow position: chr11:8428400-8428598 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 13-224
Cow position: chr11:52983566-52983768 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 13-232
Cow position: chr11:249595-249380 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 13-237
Cow position: chr11:18587718-18587489 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 76, 64

Conread position: 13-242
Cow position: chr11:42044100-42043885 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 13-287
Cow position: chr11:48085807-48086084 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 14

Conread position: 14-312
Cow position: chr11:17036639-17036343 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 210, 62

Conread position: 17-246
Cow position: chr11:83033343-83033124 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 60

Conread position: 17-287
Cow position: chr11:29659456-29659725 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 203, 48

Conread position: 17-287
Cow position: chr11:66188429-66188155 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 112, 62

Conread position: 18-250
Cow position: chr11:42182943-42183154 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 206, 14

Conread position: 18-257
Cow position: chr11:4653083-4652845 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 61

Conread position: 18-274
Cow position: chr11:30493893-30494143 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 202, 63

Conread position: 18-287
Cow position: chr11:65157516-65157239 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 119, 60

Conread position: 20-284
Cow position: chr11:17083414-17083151 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 109, 36

Conread position: 20-308
Cow position: chr11:73573543-73573838 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 164, 64

Conread position: 21-287
Cow position: chr11:80413114-80412843 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 205, 34

Conread position: 22-287
Cow position: chr11:5201747-5201480 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 196, 44

Conread position: 22-287
Cow position: chr11:27405173-27404905 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 56

Conread position: 22-311
Cow position: chr11:15285718-15285429 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 228, 56

Conread position: 23-237
Cow position: chr11:48496694-48496486 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 23-246
Cow position: chr11:2092233-2092457 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 74

Conread position: 25-241
Cow position: chr11:69119193-69119407 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 202, 52

Conread position: 25-306
Cow position: chr11:42160159-42159878 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 39

Conread position: 26-217
Cow position: chr11:64406128-64406315 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 26-278
Cow position: chr11:30370010-30370258 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 199, 50

Conread position: 29-304
Cow position: chr11:80564198-80564480 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 198, 52

Conread position: 35-303
Cow position: chr11:8437778-8437509 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 187, 43

Conread position: 36-242
Cow position: chr11:48248305-48248102 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 43

Conread position: 36-242
Cow position: chr11:82289487-82289690 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 36-267
Cow position: chr11:19946348-19946572 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 171, 9

Conread position: 36-287
Cow position: chr11:24599477-24599232 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 72

Conread position: 36-294
Cow position: chr11:17676458-17676202 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 191, 35

Conread position: 36-294
Cow position: chr11:41603777-41603528 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 41

Conread position: 39-294
Cow position: chr11:47724818-47725062 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 85, 37

Conread position: 39-294
Cow position: chr11:84890805-84890555 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 79

Conread position: 39-311
Cow position: chr11:33409345-33409073 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 184, 32

Conread position: 40-217
Cow position: chr11:53279798-53279628 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 53

Conread position: 40-305
Cow position: chr11:41313740-41313479 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 184, 41

Conread position: 41-215
Cow position: chr11:70619959-70620129 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 41-243
Cow position: chr11:35803051-35803251 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 141, 44

Conread position: 41-287
Cow position: chr11:46922981-46922721 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 41-287
Cow position: chr11:62813034-62812787 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 14

Conread position: 41-292
Cow position: chr11:18910961-18910713 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 37

Conread position: 42-259
Cow position: chr11:72292461-72292680 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 48

Conread position: 42-287
Cow position: chr11:16342312-16342082 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 238, 35

Conread position: 42-310
Cow position: chr11:82740426-82740684 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 234, 35

Conread position: 43-232
Cow position: chr11:28168505-28168321 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 43-287
Cow position: chr11:41094-41336 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 75

Conread position: 43-287
Cow position: chr11:17721885-17721635 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 64

Conread position: 43-300
Cow position: chr11:30354977-30355223 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 87, 28

Conread position: 44-274
Cow position: chr11:31410963-31410728 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 59

Conread position: 50-287
Cow position: chr11:4637247-4637009 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 191, 27

Conread position: 50-294
Cow position: chr11:30867107-30867350 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 177, 58

Conread position: 52-250
Cow position: chr11:30483845-30484034 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 52-267
Cow position: chr11:36920651-36920429 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 133, 24

Conread position: 53-239
Cow position: chr11:3790764-3790951 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 24

Conread position: 54-220
Cow position: chr11:10363458-10363297 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 24

Conread position: 58-242
Cow position: chr11:29699767-29699585 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 20

Conread position: 58-306
Cow position: chr11:9699320-9699071 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 61

Conread position: 61-287
Cow position: chr11:1932556-1932322 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 17

Conread position: 65-284
Cow position: chr11:58927517-58927735 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 14

Conread position: 67-239
Cow position: chr11:82731064-82730887 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 28

Conread position: 69-246
Cow position: chr11:11523523-11523341 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 19

Conread position: 70-287
Cow position: chr11:13499957-13500176 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 20

Conread position: 70-293
Cow position: chr11:25119993-25119764 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 13, 29

Conread position: 71-312
Cow position: chr11:19500855-19500609 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 170

Conread position: 74-241
Cow position: chr11:19606520-19606687 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 19

Conread position: 75-239
Cow position: chr11:62609541-62609713 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 78-288
Cow position: chr11:62663292-62663075 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 77

Conread position: 79-233
Cow position: chr11:34413394-34413237 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 9

Conread position: 79-287
Cow position: chr11:30964288-30964509 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 38

Conread position: 79-287
Cow position: chr11:81406219-81406001 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 41

Conread position: 79-293
Cow position: chr11:31227906-31228125 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 190

Conread position: 81-267
Cow position: chr11:36112370-36112563 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 62

Conread position: 81-273
Cow position: chr11:39249919-39250117 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 8

Conread position: 81-287
Cow position: chr11:30639003-30638786 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 83-266
Cow position: chr11:63909715-63909532 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 68

Conread position: 83-267
Cow position: chr11:35536535-35536729 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 79

Conread position: 83-287
Cow position: chr11:62742695-62742482 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 69

Conread position: 84-229
Cow position: chr11:53553167-53553314 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 101

Conread position: 85-287
Cow position: chr11:63866708-63866495 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 88-241
Cow position: chr11:49255358-49255509 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 97

Conread position: 88-287
Cow position: chr11:866247-866446 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 10

Conread position: 89-287
Cow position: chr11:39855059-39854856 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 90-287
Cow position: chr11:18924699-18924913 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 90-287
Cow position: chr11:30843061-30842859 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 15

Conread position: 90-306
Cow position: chr11:80639595-80639364 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 184

Conread position: 92-287
Cow position: chr11:70250871-70251080 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 107

Conread position: 92-288
Cow position: chr11:29786541-29786326 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 95-303
Cow position: chr11:10992226-10992444 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 96-242
Cow position: chr11:83579215-83579065 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 97-223
Cow position: chr11:13075848-13075719 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 71

Conread position: 99-224
Cow position: chr11:35874038-35873909 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 99-226
Cow position: chr11:76822121-76821993 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 99-239
Cow position: chr11:47882768-47882913 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 99-242
Cow position: chr11:64090132-64089987 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 121

Conread position: 99-267
Cow position: chr11:897638-897812 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 99-271
Cow position: chr11:37425177-37425005 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 23

Conread position: 99-286
Cow position: chr11:18447527-18447336 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 132

Conread position: 99-287
Cow position: chr11:16801987-16801812 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 99-287
Cow position: chr11:18914990-18915176 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 159
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 116

Conread position: 99-287
Cow position: chr11:21885798-21885996 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 58

Conread position: 99-299
Cow position: chr11:38211610-38211822 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 99-306
Cow position: chr11:11533963-11533751 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 97

Conread position: 99-306
Cow position: chr11:80820038-80819832 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 58

Conread position: 100-287
Cow position: chr11:35213202-35213005 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 179

Conread position: 100-301
Cow position: chr11:35669986-35669778 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 92

Conread position: 101-221
Cow position: chr11:22499397-22499276 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 55

Conread position: 102-242
Cow position: chr11:53717839-53717694 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 102-242
Cow position: chr11:58173593-58173736 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 59

Conread position: 102-260
Cow position: chr11:65803903-65803741 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 157

Conread position: 102-287
Cow position: chr11:3896731-3896532 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 102-287
Cow position: chr11:11469680-11469490 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 181

Conread position: 102-287
Cow position: chr11:15382535-15382329 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 102-287
Cow position: chr11:30895036-30894837 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 103-284
Cow position: chr11:85271769-85271581 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 104-223
Cow position: chr11:17278702-17278583 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 39

Conread position: 104-223
Cow position: chr11:32691001-32690878 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 104-234
Cow position: chr11:83230430-83230297 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 104-237
Cow position: chr11:47837290-47837426 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 104-240
Cow position: chr11:22747358-22747221 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 104-241
Cow position: chr11:17831251-17831110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 104-242
Cow position: chr11:56290481-56290623 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 104-243
Cow position: chr11:3234045-3234188 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 104-246
Cow position: chr11:17321617-17321770 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 67

Conread position: 104-259
Cow position: chr11:46427438-46427280 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 126

Conread position: 104-268
Cow position: chr11:84977389-84977219 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 104-269
Cow position: chr11:71021970-71022146 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 158

Conread position: 104-274
Cow position: chr11:30210879-30211042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 14

Conread position: 104-274
Cow position: chr11:34136213-34136393 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 104

Conread position: 104-274
Cow position: chr11:65826781-65826599 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 104-285
Cow position: chr11:63382221-63382033 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 104-287
Cow position: chr11:27462128-27461945 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 53

Conread position: 104-287
Cow position: chr11:30172279-30172465 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 36

Conread position: 104-287
Cow position: chr11:35109568-35109374 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 95

Conread position: 104-287
Cow position: chr11:51196105-51195931 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 176, 13

Conread position: 104-287
Cow position: chr11:64408946-64409132 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 39

Conread position: 104-288
Cow position: chr11:18509061-18508862 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 104-293
Cow position: chr11:62889924-62889720 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 104-293
Cow position: chr11:77013754-77013942 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 39

Conread position: 104-298
Cow position: chr11:27449641-27449454 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 48

Conread position: 104-302
Cow position: chr11:65495366-65495164 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 15

Conread position: 104-304
Cow position: chr11:27565303-27565500 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 105-242
Cow position: chr11:50072908-50073049 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 105-244
Cow position: chr11:17638564-17638423 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 124

Conread position: 105-267
Cow position: chr11:55052842-55053012 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 105-301
Cow position: chr11:4225068-4225271 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 29

Conread position: 105-312
Cow position: chr11:44878350-44878545 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 106-230
Cow position: chr11:73512471-73512344 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 114

Conread position: 106-247
Cow position: chr11:67312752-67312897 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 106-283
Cow position: chr11:9698874-9699051 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 166, 126

Conread position: 107-287
Cow position: chr11:78820124-78820315 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 54

Conread position: 109-223
Cow position: chr11:3248731-3248614 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 109-243
Cow position: chr11:79019084-79018946 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 109-287
Cow position: chr11:34467545-34467728 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 109-312
Cow position: chr11:20205877-20205664 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 110-274
Cow position: chr11:84764012-84764174 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 41

Conread position: 111-277
Cow position: chr11:70978757-70978584 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 95

Conread position: 111-293
Cow position: chr11:63165670-63165479 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 115-242
Cow position: chr11:8107425-8107556 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 54

Conread position: 115-287
Cow position: chr11:58185865-58186038 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 126

Conread position: 115-312
Cow position: chr11:81066067-81065856 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 85

Conread position: 118-286
Cow position: chr11:63478361-63478527 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 51

Conread position: 120-312
Cow position: chr11:42084686-42084479 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 121-221
Cow position: chr11:62372765-62372864 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 122-240
Cow position: chr11:31885714-31885832 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 122-287
Cow position: chr11:62483970-62483808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 158, 115

Conread position: 124-287
Cow position: chr11:66685912-66685744 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 108

Conread position: 125-305
Cow position: chr11:67912156-67911976 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 155, 40

Conread position: 126-287
Cow position: chr11:2484799-2484630 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 27

Conread position: 126-287
Cow position: chr11:80296857-80296693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 155

Conread position: 126-305
Cow position: chr11:42206417-42206608 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 127-226
Cow position: chr11:32782887-32782788 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 127-230
Cow position: chr11:34238574-34238471 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 127-274
Cow position: chr11:905386-905242 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 127-287
Cow position: chr11:15607975-15607823 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 28

Conread position: 127-287
Cow position: chr11:30986638-30986802 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 98, 26

Conread position: 127-287
Cow position: chr11:48315400-48315233 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 127-287
Cow position: chr11:60720459-60720288 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 127-287
Cow position: chr11:63499130-63498965 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 28

Conread position: 127-293
Cow position: chr11:77241698-77241874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 127-293
Cow position: chr11:80586271-80586438 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 153, 0

Conread position: 127-294
Cow position: chr11:22884410-22884579 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 22

Conread position: 127-294
Cow position: chr11:25320182-25320337 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 98

Conread position: 128-242
Cow position: chr11:56895977-56895864 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 128-283
Cow position: chr11:49396528-49396364 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 129-245
Cow position: chr11:47164920-47164805 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 129-246
Cow position: chr11:16796223-16796343 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 129-274
Cow position: chr11:33993165-33993306 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 129-274
Cow position: chr11:79707712-79707855 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 114, 51

Conread position: 129-279
Cow position: chr11:15366974-15366821 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 129-285
Cow position: chr11:49210823-49210653 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 83

Conread position: 129-287
Cow position: chr11:1485228-1485068 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 129-287
Cow position: chr11:46784473-46784629 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 151, 30

Conread position: 129-304
Cow position: chr11:49207709-49207894 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 30

Conread position: 129-306
Cow position: chr11:63484936-63485116 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 169

Conread position: 129-306
Cow position: chr11:66104397-66104209 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 177

Conread position: 129-311
Cow position: chr11:67948743-67948564 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 160, 93

Conread position: 129-312
Cow position: chr11:86895375-86895566 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 130-265
Cow position: chr11:69139948-69139813 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 8

Conread position: 130-287
Cow position: chr11:77227538-77227696 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 112

Conread position: 130-287
Cow position: chr11:85186528-85186362 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 130-312
Cow position: chr11:45671370-45671190 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 150, 93

Conread position: 131-283
Cow position: chr11:62566843-62566990 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 17

Conread position: 131-287
Cow position: chr11:7571625-7571786 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 131-287
Cow position: chr11:25721993-25721839 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 7

Conread position: 132-251
Cow position: chr11:35860584-35860700 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 135-300
Cow position: chr11:19508264-19508422 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 154, 14

Conread position: 136-260
Cow position: chr11:60493732-60493610 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 110

Conread position: 138-311
Cow position: chr11:75918596-75918768 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 83

Conread position: 138-312
Cow position: chr11:4621423-4621241 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 140-287
Cow position: chr11:30857047-30857201 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 140-287
Cow position: chr11:74839620-74839769 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 87, 140

Conread position: 140-300
Cow position: chr11:4411859-4411696 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 151

Conread position: 142-242
Cow position: chr11:58228627-58228727 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 142-287
Cow position: chr11:75388363-75388211 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 142-305
Cow position: chr11:13684699-13684534 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 138, 96

Conread position: 142-312
Cow position: chr11:69676341-69676161 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 125

Conread position: 142-312
Cow position: chr11:71814718-71814896 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 143-277
Cow position: chr11:37041984-37042129 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 143-284
Cow position: chr11:72401720-72401572 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 143-287
Cow position: chr11:53318568-53318701 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 40

Conread position: 145-287
Cow position: chr11:15591460-15591314 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 145-287
Cow position: chr11:35276284-35276417 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 145-287
Cow position: chr11:48247047-48246910 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 73

Conread position: 145-287
Cow position: chr11:54872745-54872595 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 33

Conread position: 145-287
Cow position: chr11:56114955-56115103 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 145-287
Cow position: chr11:78672685-78672837 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 145-304
Cow position: chr11:83249417-83249581 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 151

Conread position: 146-313
Cow position: chr11:53487138-53486966 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 61

Conread position: 147-271
Cow position: chr11:43965861-43965736 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 63

Conread position: 149-267
Cow position: chr11:18210155-18210038 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 149-279
Cow position: chr11:62081949-62081815 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 149-285
Cow position: chr11:7617188-7617044 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 149-287
Cow position: chr11:8422099-8421959 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 157-312
Cow position: chr11:63483969-63484136 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 160-287
Cow position: chr11:81340511-81340378 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 163-305
Cow position: chr11:25209429-25209569 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 15

Conread position: 164-287
Cow position: chr11:33289429-33289303 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 52

Conread position: 164-287
Cow position: chr11:57170565-57170444 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 50

Show alignments to all cow chromosomes.