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Cow genome map

           
Conread name:
           
End1-UMC-pd10en2-002-f05
        

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:44626458-44626280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:17613433-17613248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:13954301-13954491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr13:20649894-20650094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
172, 80
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:6153693-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:8652349-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:15528942-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:15903106-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:49520732-49520942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 72
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:12202456-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
145, 107
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:17800162-17799958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:20684031-20684250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:56678104-56677893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr13:8402148-8401933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:17966119-17966334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:21176232-21176444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:31813961-31813750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:37981658-37981869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:56155069-56155276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr13:13176741-13176524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:7663334-7663551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr13:6086812-6087026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr13:32826366-32826611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
106, 77
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr13:51901682-51901450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr13:9593598-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:47022449-47022227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
228, 31
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:53566685-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:3211641-3211411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr13:43184782-43185019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr13:547573-547354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:51940826-51940592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:37484184-37484422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:3315588-3315817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:12546821-12547052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:14771545-14771308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
212, 107
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:15281848-15282080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:17439680-17439912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:20706116-20706351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
226, 70
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:23167007-23167247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:23960723-23960946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr13:55316099-55316341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 76
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr13:2414118-2413886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr13:5082742-5082504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr13:20563085-20562849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:3989293-3989057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:11381632-11381873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:18172428-18172188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:21135810-21136053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
163, 77
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:23856302-23856063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:52585932-52586186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:60974172-60973932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:1042876-1043121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
237, 116
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:15110409-15110163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:17622371-17622135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
215, 49
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr13:15884930-15885176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr13:55727990-55727739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
221, 63
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:41806865-41806601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:7076347-7076087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:11321526-11321784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:37818660-37818924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr13:35526120-35526378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
224, 31
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:5758251-5758519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
211, 78
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:12282924-12282654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:17498307-17498036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:17021639-17021910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
224, 70
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:9587499-9587772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:13338947-13338671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
232, 70
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:25579099-25579381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
211, 22
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:60509031-60509311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
219, 28
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:23479117-23478840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:44322990-44322699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:15974702-15974424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:18166823-18166537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
222, 80
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:22085654-22085927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:23667346-23667062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:28552683-28552391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:152044-151774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
234, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:1569013-1568738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
222, 90
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:5263200-5263475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:5671501-5671782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:6540218-6540497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:7265035-7265302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:7332910-7333208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:9906823-9906532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:10924823-10925119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:12670358-12670648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:14063432-14063717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
228, 12
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:14576296-14576019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
190, 36
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:15041384-15041671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
219, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:15194642-15194917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:16714172-16714462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:17114288-17114577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:17292043-17292324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
218, 104
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:17569010-17569293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:17745329-17745062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:18852170-18851892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:18999628-18999335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:19022365-19022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:19188390-19188118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
279, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:19240525-19240243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:19393380-19393100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
226, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:20820746-20821033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 52
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:20880836-20881117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:21275944-21275660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
219, 16
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:25926880-25926592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
219, 43
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:25978101-25978390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
214, 88
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:27525175-27525455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:29831347-29831623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:32283214-32282929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
219, 32
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:34281766-34281485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
220, 70
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:35659843-35659558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
222, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:42200708-42200424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
235, 22
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:43480147-43479865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 69
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:45073167-45073442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:45353133-45352831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:46329514-46329799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:46516150-46515863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:47007640-47007909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
226, 16
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:48165335-48165619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:50750964-50751248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
235, 75
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:52477556-52477841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:52749389-52749659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
221, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:52894231-52893952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:54128503-54128794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:54702277-54701985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
187, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:56034769-56035053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
221, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:56686522-56686247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:57494098-57494369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
279, 53
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:61976875-61977154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
184, 76
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr13:49476175-49475874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr13:38329716-38329417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr13:13533580-13533864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
224, 78
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr13:36771330-36771623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr13:15991141-15991434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:15869212-15868901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:20666297-20666593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr13:620171-620458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr13:18491691-18491389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:6974250-6973950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
218, 80
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:17970938-17971260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:49503441-49503750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
218, 69
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:44003806-44003481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:54388929-54389229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 84
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:54582966-54582652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:20137914-20137602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr13:21287996-21288305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 73
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:4664776-4665066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
279, 78
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:11260358-11260062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:15958711-15958402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:24369670-24369368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 24
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr13:20155090-20154786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr13:24230299-24229992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr13:53574060-53573752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
242, 80
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr13:24586131-24585828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
228, 15
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr13:37592853-37593170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr13:48597999-48597688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:55674119-55674435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
226, 63
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr13:34555743-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr13:11820683-11820479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr13:20679428-20679216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr13:13501533-13501742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr13:48037710-48037498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr13:20871478-20871214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr13:1231735-1231455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr13:44278440-44278157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr13:9846366-9846657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr13:30258937-30258655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
185, 38
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr13:15192801-15193082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
223, 75
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr13:36877161-36876871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr13:21269493-21269776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
211, 62
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:971804-972093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:15195121-15195397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:20357805-20358082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:20473593-20473871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:21280398-21280697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:28291414-28291124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:40491301-40491021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
210, 11
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:57002816-57002526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
188, 69
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr13:34263280-34263570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:20288419-20288135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
220, 73
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:60375399-60375691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr13:13089117-13088815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr13:11821242-11820936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
241, 31
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr13:6663658-6663981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr13:18243949-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr13:6060922-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr13:890084-890293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr13:11061073-11060862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr13:42229407-42229175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr13:19320623-19320387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
220, 85
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr13:40943332-40943097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
218, 59
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr13:13261092-13260857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr13:17821180-17821445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:5279099-5279402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:17158787-17159078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
216, 74
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:18058158-18058443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:19882948-19883230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:24715331-24715053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
277, 76
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:33601125-33601425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 234
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:6442018-6442325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr13:15166905-15166701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr13:62518245-62518462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr13:6616666-6616905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr13:18696929-18696693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr13:45023126-45023359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 49
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr13:8374686-8374957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
207, 74
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr13:24753966-24753697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
276, 36
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr13:20863928-20864191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
275, 80
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr13:10845681-10845406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
275, 67
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr13:37069435-37069128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr13:18995213-18994907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr13:26698412-26698715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr13:19610481-19610760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr13:21107222-21106947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr13:34261312-34261039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr13:11397377-11397570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr13:25435038-25435254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr13:27172830-27173061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr13:12207125-12206865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr13:13196323-13196039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
227, 69
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr13:19279177-19278872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr13:7149308-7149011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
12-246
               

               
Cow position:
               
chr13:51528364-51528586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
13-217
               

               
Cow position:
               
chr13:8524538-8524742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
189, 72
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr13:19778771-19779051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
14-301
               

               
Cow position:
               
chr13:20868679-20868958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr13:9981766-9981965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
16-240
               

               
Cow position:
               
chr13:10928917-10929128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
16-274
               

               
Cow position:
               
chr13:39939492-39939751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr13:9265759-9265970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr13:827316-827071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr13:21170604-21170326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr13:20115324-20115020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr13:15288852-15289116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr13:21242015-21242272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
260, 14
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr13:15757190-15756904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
198, 43
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr13:15144298-15144499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr13:51115953-51116176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
22-283
               

               
Cow position:
               
chr13:13320863-13320605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr13:25817597-25817333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 56
               

               
Conread position:
               
23-213
               

               
Cow position:
               
chr13:29123373-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 46
               

               
Conread position:
               
23-287
               

               
Cow position:
               
chr13:20784662-20784398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr13:49022799-49023068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr13:56148591-56148382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr13:56160376-56160585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
26-279
               

               
Cow position:
               
chr13:13211951-13211701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr13:17089440-17089709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
25, 192
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr13:20314555-20314821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr13:62008176-62007911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
30-220
               

               
Cow position:
               
chr13:18181712-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
31-236
               

               
Cow position:
               
chr13:8355265-8355067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
35-274
               

               
Cow position:
               
chr13:19007988-19007758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
188, 40
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr13:11103135-11103404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr13:21283647-21283846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr13:52057615-52057379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
191, 64
               

               
Conread position:
               
36-305
               

               
Cow position:
               
chr13:18197552-18197824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr13:45108357-45108619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
244, 41
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr13:17822901-17823137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
169, 35
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr13:17611500-17611747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr13:35557055-35557307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
41-305
               

               
Cow position:
               
chr13:15257319-15257584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
181, 30
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr13:21171522-21171790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr13:8350372-8350176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr13:29663071-29662861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
208, 52
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr13:20217354-20217612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
50-306
               

               
Cow position:
               
chr13:55494479-55494733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr13:84615-84379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr13:45439553-45439336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr13:56535480-56535271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
211, 53
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr13:31529905-31529751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
71-238
               

               
Cow position:
               
chr13:6183397-6183560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
74-242
               

               
Cow position:
               
chr13:38283949-38284123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
79-287
               

               
Cow position:
               
chr13:15083679-15083465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 18
               

               
Conread position:
               
80-242
               

               
Cow position:
               
chr13:37640613-37640442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
81-223
               

               
Cow position:
               
chr13:25428204-25428348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
81-266
               

               
Cow position:
               
chr13:8233018-8232835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
81-267
               

               
Cow position:
               
chr13:40722686-40722868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 148
               

               
Conread position:
               
81-279
               

               
Cow position:
               
chr13:47964172-47964360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
81-284
               

               
Cow position:
               
chr13:50582807-50583010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr13:6189587-6189796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr13:38035859-38035643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr13:57985915-57986128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr13:58763605-58763805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
81-305
               

               
Cow position:
               
chr13:44202022-44201796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
82-287
               

               
Cow position:
               
chr13:7149491-7149695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr13:37527936-37528090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
83-242
               

               
Cow position:
               
chr13:19750736-19750571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
83-285
               

               
Cow position:
               
chr13:11231282-11231491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr13:6079391-6079599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr13:9975055-9975264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr13:19598644-19598861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr13:37614173-37614394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr13:2776298-2776064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
85-241
               

               
Cow position:
               
chr13:37803908-37803748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
85-245
               

               
Cow position:
               
chr13:24110496-24110331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
85-267
               

               
Cow position:
               
chr13:16160436-16160245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr13:12989867-12989666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr13:33974750-33974550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
86-287
               

               
Cow position:
               
chr13:50646617-50646825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
89-267
               

               
Cow position:
               
chr13:47193395-47193221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
89-284
               

               
Cow position:
               
chr13:15239501-15239704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr13:14927275-14927069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr13:45073908-45074097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 65
               

               
Conread position:
               
90-266
               

               
Cow position:
               
chr13:3209307-3209491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
90-287
               

               
Cow position:
               
chr13:6465676-6465879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
90-287
               

               
Cow position:
               
chr13:7046883-7046684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr13:21235667-21235862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
95-286
               

               
Cow position:
               
chr13:47186241-47186035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
97-287
               

               
Cow position:
               
chr13:17813476-17813275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
98-240
               

               
Cow position:
               
chr13:15460772-15460918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
98-246
               

               
Cow position:
               
chr13:43525231-43525382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
98-284
               

               
Cow position:
               
chr13:47243551-47243747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
99-214
               

               
Cow position:
               
chr13:47634510-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
99-223
               

               
Cow position:
               
chr13:11460636-11460508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-243
               

               
Cow position:
               
chr13:49205001-49204863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr13:14645054-14644859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr13:46525426-46525623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr13:1462294-1462488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr13:20534898-20534704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 107
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr13:28440535-28440729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
99-300
               

               
Cow position:
               
chr13:25504535-25504326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr13:20879823-20880021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr13:42849131-42849355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
101-285
               

               
Cow position:
               
chr13:12974815-12974621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr13:8450331-8450137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
102-237
               

               
Cow position:
               
chr13:37621360-37621496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
102-241
               

               
Cow position:
               
chr13:50568406-50568549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
103-243
               

               
Cow position:
               
chr13:40634866-40634719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
103-287
               

               
Cow position:
               
chr13:57769990-57770179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
103-312
               

               
Cow position:
               
chr13:11808573-11808362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
104-242
               

               
Cow position:
               
chr13:51813938-51814076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
104-266
               

               
Cow position:
               
chr13:42640380-42640218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-267
               

               
Cow position:
               
chr13:38702878-38703054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
104-269
               

               
Cow position:
               
chr13:10210661-10210833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
104-283
               

               
Cow position:
               
chr13:21980978-21981162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
104-283
               

               
Cow position:
               
chr13:32017514-32017708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr13:10522932-10522745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr13:15143845-15144025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr13:4552812-4552629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr13:52536563-52536375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr13:55765180-55765372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
104-304
               

               
Cow position:
               
chr13:18092877-18093081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
104-306
               

               
Cow position:
               
chr13:6926515-6926298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 206
               

               
Conread position:
               
104-307
               

               
Cow position:
               
chr13:54652331-54652535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr13:6486254-6486449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr13:15069955-15069776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr13:52055595-52055789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
106-241
               

               
Cow position:
               
chr13:21295071-21294930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
106-305
               

               
Cow position:
               
chr13:18340529-18340316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr13:16908213-16907999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 203
               

               
Conread position:
               
107-285
               

               
Cow position:
               
chr13:53850819-53850626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
107-314
               

               
Cow position:
               
chr13:21188362-21188155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr13:8667611-8667419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr13:38012325-38012142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
110-286
               

               
Cow position:
               
chr13:7104646-7104460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
114-287
               

               
Cow position:
               
chr13:49283792-49283974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
115-287
               

               
Cow position:
               
chr13:13265544-13265368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr13:23478882-23478704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr13:33854698-33854877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr13:58422054-58421894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
163, 14
               

               
Conread position:
               
120-287
               

               
Cow position:
               
chr13:22601713-22601882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
122-242
               

               
Cow position:
               
chr13:20826747-20826868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
122-299
               

               
Cow position:
               
chr13:3153726-3153539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
124-305
               

               
Cow position:
               
chr13:9391534-9391353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr13:57323119-57322953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr13:52027165-52027332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
127-267
               

               
Cow position:
               
chr13:13286404-13286546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
127-274
               

               
Cow position:
               
chr13:6975874-6976025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
127-286
               

               
Cow position:
               
chr13:16099150-16099324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr13:3594292-3594136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
153, 35
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr13:31507473-31507638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr13:34532961-34533125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr13:37554903-37555067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr13:52913844-52913680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr13:21277496-21277674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
153, 110
               

               
Conread position:
               
128-219
               

               
Cow position:
               
chr13:16156255-16156346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-285
               

               
Cow position:
               
chr13:10711445-10711608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
129-286
               

               
Cow position:
               
chr13:11565806-11565645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr13:1363424-1363264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr13:9707780-9707943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
129-303
               

               
Cow position:
               
chr13:16163551-16163378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 148
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr13:16790178-16789996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
130-246
               

               
Cow position:
               
chr13:12237413-12237297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-246
               

               
Cow position:
               
chr13:15808734-15808618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
130-283
               

               
Cow position:
               
chr13:1037607-1037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr13:5092426-5092606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
132-242
               

               
Cow position:
               
chr13:18215332-18215222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr13:41979182-41979333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chr13:8240628-8240467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 84
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chr13:52891198-52891040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
134-242
               

               
Cow position:
               
chr13:28652705-28652597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-296
               

               
Cow position:
               
chr13:57446161-57446318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
139-287
               

               
Cow position:
               
chr13:1339182-1339341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
142-285
               

               
Cow position:
               
chr13:55775316-55775171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr13:21425874-21426015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr13:55713480-55713621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
142-300
               

               
Cow position:
               
chr13:52249092-52249253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr13:57355998-57355839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 70
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr13:26395417-26395238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
143-285
               

               
Cow position:
               
chr13:37405666-37405520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
143-287
               

               
Cow position:
               
chr13:56431870-56432017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
144-287
               

               
Cow position:
               
chr13:23399720-23399570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
145-274
               

               
Cow position:
               
chr13:27198861-27198729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
145-287
               

               
Cow position:
               
chr13:53619957-53619804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
146-286
               

               
Cow position:
               
chr13:23823082-23823225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
147-287
               

               
Cow position:
               
chr13:10758078-10757944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
148-287
               

               
Cow position:
               
chr13:6951529-6951384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
149-236
               

               
Cow position:
               
chr13:5930356-5930443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr13:22345325-22345499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
153-293
               

               
Cow position:
               
chr13:9108730-9108874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
157-287
               

               
Cow position:
               
chr13:47651475-47651611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
158-287
               

               
Cow position:
               
chr13:23795447-23795575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
158-287
               

               
Cow position:
               
chr13:34299919-34300044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
159-287
               

               
Cow position:
               
chr13:25313210-25313345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
160-306
               

               
Cow position:
               
chr13:7097524-7097372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
164-287
               

               
Cow position:
               
chr13:17815172-17815048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
166-279
               

               
Cow position:
               
chr13:25924290-25924409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
169-271
               

               
Cow position:
               
chr13:27727122-27727019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
175-286
               

               
Cow position:
               
chr13:9612992-9612880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
182-287
               

               
Cow position:
               
chr13:48165830-48165935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
98, 93
               
Show alignments to all cow chromosomes.