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Cow genome map

           
Conread name:
           
End1-UMC-pd10en2-002-f05
        

               
Conread position:
               
1-172
               

               
Cow position:
               
chr18:43065391-43065556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:19687883-19688074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:4182326-4182121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr18:13507876-13507672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr18:55461845-55461639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:23766550-23766338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
174, 76
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr18:38344668-38344878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 81
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:42751749-42751529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:51190728-51190525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:33007923-33008142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:38607086-38607297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:45570877-45571088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:19619815-19620018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:33407478-33407685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:46135605-46135818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:50082387-50082180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr18:56183804-56184021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:8299876-8300104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr18:48828918-48828687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:25282690-25282463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
216, 70
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:37023690-37023460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr18:6609995-6609758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:19273236-19273001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:36458796-36459024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:18369500-18369266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:22056017-22055771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:22214345-22214584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:25647389-25647151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:37002496-37002728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:56159324-56159555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:3370761-3370998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:16997115-16997351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:19896592-19896352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:39875396-39875163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr18:21102909-21102677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:39434689-39434933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr18:52854913-52855171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:29958294-29958045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
222, 26
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:24266547-24266272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
222, 75
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:7956006-7956283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
224, 84
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:48451921-48452198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:46453012-46452748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:32883169-32883442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:3209576-3209866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 201
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:11867203-11867485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:29356764-29356486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
277, 76
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:56181599-56181312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:3211735-3212028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:12113514-12113220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:1954727-1954431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
219, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:3132891-3132624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:4496023-4495741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:4556303-4556015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:4602150-4601896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:5578169-5578444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
279, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:5632128-5632414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
226, 80
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:9010584-9010854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:9089562-9089840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
226, 48
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:9365779-9366071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:9557846-9558115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
226, 56
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:10891378-10891660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:11691545-11691257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:12023772-12023490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:12117979-12117704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:18340105-18339813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:18592338-18592613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:18919093-18918814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:19193503-19193223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:19849893-19849622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
279, 88
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:20174266-20173988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:20641628-20641352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:23715025-23714740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:26998744-26999038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
203, 83
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:31672647-31672369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
237, 55
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:37382230-37381942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
207, 75
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:38985554-38985840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:39623664-39623953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:39662642-39662930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
204, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42290460-42290185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
221, 32
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42293188-42292913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
221, 32
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42432231-42431943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42479725-42479431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
227, 75
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:43950686-43950977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:45904031-45903747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:49017365-49017632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:49100507-49100236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 80
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:50095531-50095260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:51406046-51405768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:51594939-51594668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
279, 25
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:51643503-51643220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:54130471-54130193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 85
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:55505270-55505552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:42747459-42747748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:44262488-44262773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:28658046-28657764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
224, 70
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr18:43555662-43555386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
255, 74
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:33896565-33896259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:9974461-9974175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:39001939-39001656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
189, 63
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:7108991-7109293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
214, 71
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:51656181-51655883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
229, 78
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:1571374-1571076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:9066562-9066864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:48242052-48242345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
189, 78
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:23447218-23446888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:30586357-30586070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:51691600-51691301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
222, 16
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:3018213-3017915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:5766275-5766581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
199, 78
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:12273520-12273827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 83
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:28101494-28101802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 77
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:29648648-29648957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
226, 41
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr18:25206326-25206140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr18:4540015-4539805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr18:36201764-36201537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
224, 94
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr18:16686473-16686240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr18:51392773-51392547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:17005121-17005368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
206, 74
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:33299765-33300024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr18:54572428-54572142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr18:4668628-4668359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:8171222-8170942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 74
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:10214332-10214042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:43283893-43283607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:49841142-49841432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:2864131-2863834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:6309945-6310245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
183, 62
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:50974430-50974115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr18:23616016-23615698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr18:45104580-45104350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 98
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr18:22121016-22120793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
219, 61
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:47511870-47512131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 47
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:15613995-15613715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:48713414-48713691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 74
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:56155365-56155665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 234
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr18:14586600-14586324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
228, 73
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr18:48633657-48633938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
291, 32
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr18:44802022-44801813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr18:36230858-36230641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:12242142-12242426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:37303010-37303303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr18:56191104-56190871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr18:52635212-52634974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:1399485-1399203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:20126172-20126441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:50382125-50382399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
211, 8
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:55498938-55499219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr18:7965099-7965381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
191, 48
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr18:35873945-35874227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr18:31711698-31711421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr18:4381160-4381359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr18:47967055-47966838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr18:46276438-46276150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr18:3158732-3158498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr18:25601447-25601148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 43
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr18:29474611-29474901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr18:12270378-12270597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr18:34834362-34834636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr18:19883402-19883630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
149, 68
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr18:49038334-49038631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
12-300
               

               
Cow position:
               
chr18:11779529-11779815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
215, 37
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr18:52703979-52703712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr18:4871949-4872203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
234, 63
               

               
Conread position:
               
16-242
               

               
Cow position:
               
chr18:15880974-15880740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr18:55119747-55120016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
16-304
               

               
Cow position:
               
chr18:15517299-15517008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
17-208
               

               
Cow position:
               
chr18:44483893-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
17-312
               

               
Cow position:
               
chr18:52403093-52402783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
18-235
               

               
Cow position:
               
chr18:11891614-11891817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
18-245
               

               
Cow position:
               
chr18:23162772-23162983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
20-217
               

               
Cow position:
               
chr18:52406583-52406763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr18:7076841-7077031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
21-287
               

               
Cow position:
               
chr18:12584961-12584695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
22-212
               

               
Cow position:
               
chr18:51212064-51212249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
22-216
               

               
Cow position:
               
chr18:2849388-2849199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr18:11684864-11685057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
22-246
               

               
Cow position:
               
chr18:55000860-55000642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr18:10977329-10977077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr18:21195461-21195208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr18:29065500-29065243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
258, 32
               

               
Conread position:
               
22-300
               

               
Cow position:
               
chr18:35535267-35534988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
23-223
               

               
Cow position:
               
chr18:11377249-11377441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
23-223
               

               
Cow position:
               
chr18:56172137-56171937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
23-285
               

               
Cow position:
               
chr18:26938864-26939119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
23-287
               

               
Cow position:
               
chr18:10575987-10576252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
23-287
               

               
Cow position:
               
chr18:23630721-23630466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr18:10904732-10905002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr18:2146701-2146430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
23-304
               

               
Cow position:
               
chr18:42431728-42431449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
27-242
               

               
Cow position:
               
chr18:4758151-4757937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
27-243
               

               
Cow position:
               
chr18:11313050-11312839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr18:43797065-43796810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr18:53038723-53038910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
35-312
               

               
Cow position:
               
chr18:32189614-32189340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
36-283
               

               
Cow position:
               
chr18:28930742-28930496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr18:22180887-22180632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
36-305
               

               
Cow position:
               
chr18:25598344-25598067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr18:46727486-46727684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
38-246
               

               
Cow position:
               
chr18:24508339-24508131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
39-217
               

               
Cow position:
               
chr18:20798220-20798399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
41-220
               

               
Cow position:
               
chr18:29759929-29760101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
41-284
               

               
Cow position:
               
chr18:9040808-9040558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr18:11790824-11791067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr18:22790186-22789941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
42-287
               

               
Cow position:
               
chr18:22569164-22568919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
43-311
               

               
Cow position:
               
chr18:49015030-49015291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr18:47416900-47417149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr18:47525308-47525541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr18:9176812-9176996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr18:19868352-19868109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
59-242
               

               
Cow position:
               
chr18:52413883-52414063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr18:14225308-14225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
63-287
               

               
Cow position:
               
chr18:52251936-52251705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
64-287
               

               
Cow position:
               
chr18:6470007-6470241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
66-306
               

               
Cow position:
               
chr18:50359251-50359496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr18:41950134-41950362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr18:22516612-22516387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
70-312
               

               
Cow position:
               
chr18:21782618-21782862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
73-236
               

               
Cow position:
               
chr18:30794351-30794516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr18:47705161-47705329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr18:38806512-38806723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
79-312
               

               
Cow position:
               
chr18:34219995-34219732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
81-221
               

               
Cow position:
               
chr18:5711720-5711578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr18:17391054-17390841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr18:24719243-24719457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr18:51757025-51757243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
82-285
               

               
Cow position:
               
chr18:18843954-18844158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
83-223
               

               
Cow position:
               
chr18:10656367-10656516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr18:45637478-45637325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
83-246
               

               
Cow position:
               
chr18:43020471-43020300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr18:25006562-25006357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
83-304
               

               
Cow position:
               
chr18:36768878-36768649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr18:35367262-35367035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
84-287
               

               
Cow position:
               
chr18:30360216-30359994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
85-223
               

               
Cow position:
               
chr18:4535088-4534946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr18:3180344-3180559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr18:46880226-46880011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr18:47565762-47565964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
85-303
               

               
Cow position:
               
chr18:23821893-23821665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
85-309
               

               
Cow position:
               
chr18:46647221-46646992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr18:47485981-47486224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr18:47693000-47693201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr18:47125463-47125272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr18:47824833-47824592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
89-217
               

               
Cow position:
               
chr18:41511566-41511432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
90-241
               

               
Cow position:
               
chr18:46072402-46072558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
90-312
               

               
Cow position:
               
chr18:42427559-42427793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
91-291
               

               
Cow position:
               
chr18:52877301-52877498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
95-287
               

               
Cow position:
               
chr18:8949850-8949650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
95-287
               

               
Cow position:
               
chr18:44917701-44917903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 166
               

               
Conread position:
               
97-287
               

               
Cow position:
               
chr18:2794023-2793827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
98-223
               

               
Cow position:
               
chr18:21740867-21740738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-237
               

               
Cow position:
               
chr18:28923899-28923754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-287
               

               
Cow position:
               
chr18:38601937-38601736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-287
               

               
Cow position:
               
chr18:50632495-50632296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 123
               

               
Conread position:
               
99-220
               

               
Cow position:
               
chr18:16378872-16378997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
99-223
               

               
Cow position:
               
chr18:17660611-17660483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-232
               

               
Cow position:
               
chr18:21081942-21081806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
99-239
               

               
Cow position:
               
chr18:38687033-38687173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
99-242
               

               
Cow position:
               
chr18:47548037-47547889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
99-243
               

               
Cow position:
               
chr18:31082399-31082250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-244
               

               
Cow position:
               
chr18:23505280-23505431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr18:2773443-2773238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr18:2776946-2776741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr18:20462746-20462558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr18:38937771-38937969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr18:52649398-52649190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-293
               

               
Cow position:
               
chr18:7963384-7963572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
99-309
               

               
Cow position:
               
chr18:47183344-47183141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr18:30341230-30341033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
102-230
               

               
Cow position:
               
chr18:44523040-44523171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
102-242
               

               
Cow position:
               
chr18:2765205-2765345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
102-258
               

               
Cow position:
               
chr18:49324481-49324317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr18:49981487-49981309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr18:51383443-51383249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
103-300
               

               
Cow position:
               
chr18:247735-247535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
103-306
               

               
Cow position:
               
chr18:15809847-15809640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
104-216
               

               
Cow position:
               
chr18:14888247-14888361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
104-234
               

               
Cow position:
               
chr18:35889141-35889012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
104-260
               

               
Cow position:
               
chr18:48961888-48962060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr18:49655639-49655828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr18:15172964-15173153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 180
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr18:24759702-24759510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr18:37189340-37189143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr18:45558101-45558292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr18:46048706-46048903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
104-303
               

               
Cow position:
               
chr18:39168486-39168688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
104-304
               

               
Cow position:
               
chr18:51192786-51192582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
105-285
               

               
Cow position:
               
chr18:53642793-53642603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr18:5647768-5647957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
105-311
               

               
Cow position:
               
chr18:43014905-43014699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
106-242
               

               
Cow position:
               
chr18:11754086-11754226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
109-239
               

               
Cow position:
               
chr18:45985666-45985531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
109-242
               

               
Cow position:
               
chr18:11672002-11672138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
109-242
               

               
Cow position:
               
chr18:21768578-21768711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
109-267
               

               
Cow position:
               
chr18:912144-911985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
109-285
               

               
Cow position:
               
chr18:33158902-33159090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
109-286
               

               
Cow position:
               
chr18:12058962-12059142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr18:4851520-4851336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr18:9846451-9846270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr18:40047539-40047344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
111-237
               

               
Cow position:
               
chr18:47410504-47410634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
111-311
               

               
Cow position:
               
chr18:24531767-24531570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr18:4489945-4489752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr18:48407702-48407909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
114-303
               

               
Cow position:
               
chr18:32243764-32243576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr18:35786022-35786202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr18:47802123-47801947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
117-312
               

               
Cow position:
               
chr18:41702804-41703011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
118-287
               

               
Cow position:
               
chr18:28822781-28822614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
119-287
               

               
Cow position:
               
chr18:47868579-47868745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
119-287
               

               
Cow position:
               
chr18:50004729-50004557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
122-267
               

               
Cow position:
               
chr18:29390220-29390073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
122-292
               

               
Cow position:
               
chr18:39860795-39860624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
124-305
               

               
Cow position:
               
chr18:41724840-41724648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
95, 166
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr18:11434732-11434901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr18:8975374-8975541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr18:9818749-9818912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr18:31557180-31557008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr18:43125067-43125222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr18:49603062-49602893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
127-300
               

               
Cow position:
               
chr18:55722482-55722662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr18:44206103-44205924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
127-312
               

               
Cow position:
               
chr18:41271240-41271420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
128-285
               

               
Cow position:
               
chr18:28322639-28322800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 84
               

               
Conread position:
               
128-287
               

               
Cow position:
               
chr18:11856883-11857045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
128-304
               

               
Cow position:
               
chr18:21187288-21187464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
129-237
               

               
Cow position:
               
chr18:49197402-49197510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-267
               

               
Cow position:
               
chr18:33492343-33492479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
129-268
               

               
Cow position:
               
chr18:54974024-54973882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr18:35582055-35581904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 91
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr18:51867560-51867407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
129-306
               

               
Cow position:
               
chr18:24022601-24022783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr18:47872024-47872206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
130-286
               

               
Cow position:
               
chr18:17195361-17195198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
130-287
               

               
Cow position:
               
chr18:45897716-45897876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
131-271
               

               
Cow position:
               
chr18:51413577-51413718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
131-279
               

               
Cow position:
               
chr18:21664726-21664581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr18:5189708-5189542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr18:19831569-19831724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
132-271
               

               
Cow position:
               
chr18:50018747-50018605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
132-287
               

               
Cow position:
               
chr18:9596169-9596326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
133-266
               

               
Cow position:
               
chr18:23921715-23921579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
133-285
               

               
Cow position:
               
chr18:19809695-19809536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
136-271
               

               
Cow position:
               
chr18:43400725-43400590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-287
               

               
Cow position:
               
chr18:49440834-49440992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
140-314
               

               
Cow position:
               
chr18:47419793-47419973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
141-305
               

               
Cow position:
               
chr18:35857929-35857758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
142-274
               

               
Cow position:
               
chr18:32290708-32290842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr18:21143968-21143819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
143-269
               

               
Cow position:
               
chr18:81969-82101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
144-242
               

               
Cow position:
               
chr18:42715316-42715217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
144-287
               

               
Cow position:
               
chr18:20057174-20057317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
144-307
               

               
Cow position:
               
chr18:12143952-12143779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
146-287
               

               
Cow position:
               
chr18:38228407-38228549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
146-287
               

               
Cow position:
               
chr18:47096429-47096572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
147-287
               

               
Cow position:
               
chr18:36501077-36500933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
151-308
               

               
Cow position:
               
chr18:10758050-10757888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
153-269
               

               
Cow position:
               
chr18:50263916-50263798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
153-287
               

               
Cow position:
               
chr18:12056673-12056545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
153-287
               

               
Cow position:
               
chr18:34444729-34444588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
153-287
               

               
Cow position:
               
chr18:44548739-44548597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr18:17007470-17007307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
158-287
               

               
Cow position:
               
chr18:29091750-29091877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
159-306
               

               
Cow position:
               
chr18:4485612-4485767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
160-287
               

               
Cow position:
               
chr18:4907161-4907293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
160-287
               

               
Cow position:
               
chr18:47680528-47680659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
160-287
               

               
Cow position:
               
chr18:47865085-47865216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
167-287
               

               
Cow position:
               
chr18:16417474-16417348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 28
               
Show alignments to all cow chromosomes.