Cow genome map

Conread name: End1-UMC-pd10en2-002-f05

Conread position: 1-198
Cow position: chr26:25299513-25299701 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-223
Cow position: chr26:5246567-5246351 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 63, 79

Conread position: 1-223
Cow position: chr26:8642857-8643068 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 127, 100

Conread position: 1-223
Cow position: chr26:11134783-11134561 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 93

Conread position: 1-223
Cow position: chr26:33567133-33566917 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 77

Conread position: 1-229
Cow position: chr26:34108675-34108890 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-232
Cow position: chr26:13021233-13021009 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 77, 0

Conread position: 1-232
Cow position: chr26:25393943-25394175 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 108, 63

Conread position: 1-233
Cow position: chr26:34847654-34847879 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 1-234
Cow position: chr26:32672524-32672289 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 91

Conread position: 1-237
Cow position: chr26:32776595-32776371 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 1-239
Cow position: chr26:22354326-22354559 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 194, 76

Conread position: 1-240
Cow position: chr26:13818336-13818567 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 168, 44

Conread position: 1-241
Cow position: chr26:2739546-2739310 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 76

Conread position: 1-241
Cow position: chr26:15200601-15200371 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 1-241
Cow position: chr26:16721779-16722009 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 226, 18

Conread position: 1-242
Cow position: chr26:10965677-10965447 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 210, 42

Conread position: 1-242
Cow position: chr26:19774389-19774154 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 1-242
Cow position: chr26:30254715-30254488 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-242
Cow position: chr26:31605318-31605552 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 0

Conread position: 1-243
Cow position: chr26:678067-677833 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 1-245
Cow position: chr26:8352873-8353120 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 71

Conread position: 1-246
Cow position: chr26:26294284-26294044 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 101

Conread position: 1-266
Cow position: chr26:14175191-14175452 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 80

Conread position: 1-267
Cow position: chr26:34256214-34256474 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 69

Conread position: 1-270
Cow position: chr26:31903078-31903350 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 221, 75

Conread position: 1-274
Cow position: chr26:33044994-33045251 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-274
Cow position: chr26:33736639-33736371 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 221, 16

Conread position: 1-276
Cow position: chr26:19459598-19459878 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 123, 16

Conread position: 1-279
Cow position: chr26:22152139-22152410 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 56

Conread position: 1-284
Cow position: chr26:7687328-7687048 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 128, 76

Conread position: 1-284
Cow position: chr26:20260492-20260776 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 219, 95

Conread position: 1-285
Cow position: chr26:25526159-25526443 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 138, 70

Conread position: 1-285
Cow position: chr26:34060246-34060532 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 222, 80

Conread position: 1-287
Cow position: chr26:798385-798109 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 16

Conread position: 1-287
Cow position: chr26:3072053-3071783 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 228, 63

Conread position: 1-287
Cow position: chr26:6514754-6515031 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 279, 84

Conread position: 1-287
Cow position: chr26:8811042-8811329 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 222, 78

Conread position: 1-287
Cow position: chr26:9491838-9492117 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 129, 40

Conread position: 1-287
Cow position: chr26:14951234-14950948 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 22

Conread position: 1-287
Cow position: chr26:16549897-16550186 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 164, 76

Conread position: 1-287
Cow position: chr26:20291770-20291494 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 33

Conread position: 1-287
Cow position: chr26:20551053-20551328 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 40

Conread position: 1-287
Cow position: chr26:27491589-27491297 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 76

Conread position: 1-287
Cow position: chr26:28251062-28251352 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 106

Conread position: 1-287
Cow position: chr26:32565928-32566208 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 232, 53

Conread position: 1-287
Cow position: chr26:32815880-32815590 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 84

Conread position: 1-287
Cow position: chr26:32955720-32955447 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 146, 74

Conread position: 1-287
Cow position: chr26:33253407-33253118 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 74

Conread position: 1-287
Cow position: chr26:34314602-34314877 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 1-287
Cow position: chr26:34724963-34724676 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 31

Conread position: 1-287
Cow position: chr26:35448972-35449254 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 223, 107

Conread position: 1-294
Cow position: chr26:4854451-4854749 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 75

Conread position: 1-294
Cow position: chr26:12145207-12144911 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 1-294
Cow position: chr26:34027126-34026828 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 31

Conread position: 1-296
Cow position: chr26:23671326-23671626 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 218, 84

Conread position: 1-297
Cow position: chr26:21243014-21243293 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 279, 76

Conread position: 1-297
Cow position: chr26:32670579-32670291 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 242, 28

Conread position: 1-300
Cow position: chr26:19446039-19446352 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 132, 16

Conread position: 1-300
Cow position: chr26:23315682-23315971 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 160, 107

Conread position: 1-302
Cow position: chr26:26888219-26887924 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 220, 33

Conread position: 1-304
Cow position: chr26:14905899-14905602 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 277, 107

Conread position: 1-306
Cow position: chr26:22249565-22249273 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 278, 70

Conread position: 1-307
Cow position: chr26:4167444-4167130 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 79

Conread position: 1-308
Cow position: chr26:31633641-31633954 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 218, 76

Conread position: 1-308
Cow position: chr26:32897959-32897662 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 235, 76

Conread position: 1-310
Cow position: chr26:13802026-13802330 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 22

Conread position: 1-310
Cow position: chr26:33112470-33112166 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 199, 68

Conread position: 1-311
Cow position: chr26:22892530-22892222 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 14

Conread position: 1-312
Cow position: chr26:9604471-9604772 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 78

Conread position: 2-242
Cow position: chr26:12964783-12964551 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 2-287
Cow position: chr26:10974029-10974327 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 93

Conread position: 2-287
Cow position: chr26:21418539-21418254 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 215, 81

Conread position: 2-287
Cow position: chr26:23097264-23096994 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 221, 33

Conread position: 2-287
Cow position: chr26:23848887-23848597 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 77

Conread position: 2-287
Cow position: chr26:27304322-27304604 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 119

Conread position: 2-287
Cow position: chr26:35704303-35704572 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 278, 15

Conread position: 2-288
Cow position: chr26:24240589-24240883 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 75

Conread position: 2-307
Cow position: chr26:9535431-9535735 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 126, 10

Conread position: 3-233
Cow position: chr26:31557021-31556794 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 104

Conread position: 3-234
Cow position: chr26:6864930-6865165 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 125, 93

Conread position: 3-239
Cow position: chr26:17148618-17148851 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 94

Conread position: 3-249
Cow position: chr26:9104365-9104129 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 3-250
Cow position: chr26:12238108-12237877 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 3-269
Cow position: chr26:8307608-8307347 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 219, 20

Conread position: 3-308
Cow position: chr26:16783738-16784045 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 142, 29

Conread position: 4-240
Cow position: chr26:19110099-19110328 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 227, 33

Conread position: 4-246
Cow position: chr26:23583031-23582798 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 5-239
Cow position: chr26:32834657-32834436 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 48

Conread position: 5-246
Cow position: chr26:32553596-32553839 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 49

Conread position: 5-287
Cow position: chr26:23924764-23925042 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 275, 12

Conread position: 5-305
Cow position: chr26:12893509-12893214 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 220, 72

Conread position: 7-287
Cow position: chr26:13979210-13978932 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 76, 94

Conread position: 9-245
Cow position: chr26:8700127-8699895 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 120, 66

Conread position: 9-287
Cow position: chr26:8306315-8306597 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 80

Conread position: 13-285
Cow position: chr26:15211726-15211988 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 267, 42

Conread position: 16-287
Cow position: chr26:12940334-12940606 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 209, 11

Conread position: 20-287
Cow position: chr26:19591412-19591677 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 51

Conread position: 21-236
Cow position: chr26:26537592-26537381 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 122, 14

Conread position: 21-287
Cow position: chr26:14481621-14481368 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 259, 47

Conread position: 22-285
Cow position: chr26:21637107-21636855 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 57

Conread position: 22-287
Cow position: chr26:20769782-20770049 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 58

Conread position: 23-287
Cow position: chr26:647792-647524 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 107, 68

Conread position: 23-306
Cow position: chr26:26950518-26950241 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 195, 54

Conread position: 24-242
Cow position: chr26:18529715-18529926 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 56

Conread position: 27-303
Cow position: chr26:22033420-22033700 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 54

Conread position: 36-221
Cow position: chr26:28339475-28339297 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 59

Conread position: 45-287
Cow position: chr26:31973382-31973602 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 235, 33

Conread position: 50-312
Cow position: chr26:19636251-19636521 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 27

Conread position: 54-287
Cow position: chr26:18825322-18825085 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 6

Conread position: 58-240
Cow position: chr26:7314587-7314767 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 45

Conread position: 58-293
Cow position: chr26:34560201-34559967 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 184, 20

Conread position: 67-223
Cow position: chr26:32361937-32362102 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 69-242
Cow position: chr26:34154105-34154280 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 13

Conread position: 81-231
Cow position: chr26:26466748-26466597 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 81-237
Cow position: chr26:6337772-6337928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 45

Conread position: 81-243
Cow position: chr26:32571275-32571442 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 7

Conread position: 82-312
Cow position: chr26:28423269-28423508 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 48, 226

Conread position: 83-288
Cow position: chr26:20825135-20824923 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 6, 74

Conread position: 83-305
Cow position: chr26:1325741-1325961 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 12

Conread position: 85-287
Cow position: chr26:9099546-9099335 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 86-312
Cow position: chr26:5836836-5836591 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 90-306
Cow position: chr26:11875231-11875004 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 196

Conread position: 97-287
Cow position: chr26:34106394-34106573 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 36

Conread position: 98-240
Cow position: chr26:33392393-33392538 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 8

Conread position: 98-249
Cow position: chr26:26328911-26329064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 36

Conread position: 98-252
Cow position: chr26:7212588-7212431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 133

Conread position: 98-284
Cow position: chr26:34611183-34610992 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 98-287
Cow position: chr26:33202072-33201872 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 99-220
Cow position: chr26:13292518-13292643 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 99-223
Cow position: chr26:18741058-18740930 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 58

Conread position: 99-227
Cow position: chr26:107024-107157 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 99-242
Cow position: chr26:33241888-33242037 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 99-245
Cow position: chr26:17651959-17652108 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 139

Conread position: 99-263
Cow position: chr26:26109619-26109459 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 57

Conread position: 99-287
Cow position: chr26:31137465-31137267 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 57

Conread position: 99-312
Cow position: chr26:5666047-5666267 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 175

Conread position: 100-274
Cow position: chr26:18381314-18381493 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 102-287
Cow position: chr26:6714298-6714100 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 102-287
Cow position: chr26:31888735-31888928 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 103-258
Cow position: chr26:25197313-25197154 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 59

Conread position: 103-271
Cow position: chr26:33038214-33038044 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 124, 21

Conread position: 104-242
Cow position: chr26:11263645-11263785 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 58

Conread position: 104-242
Cow position: chr26:16594495-16594356 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 61

Conread position: 104-272
Cow position: chr26:33527010-33526843 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 39

Conread position: 104-287
Cow position: chr26:5168402-5168591 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 49

Conread position: 104-287
Cow position: chr26:7224338-7224155 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 107

Conread position: 104-287
Cow position: chr26:17057682-17057873 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 104-287
Cow position: chr26:29889507-29889316 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 47

Conread position: 104-299
Cow position: chr26:29664155-29663943 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 104-306
Cow position: chr26:22901257-22901037 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 118, 209

Conread position: 104-312
Cow position: chr26:23624040-23623820 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 112

Conread position: 106-304
Cow position: chr26:16796200-16795998 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 37

Conread position: 109-285
Cow position: chr26:13863019-13862842 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 15

Conread position: 109-287
Cow position: chr26:32517447-32517269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 121

Conread position: 109-304
Cow position: chr26:16435647-16435436 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 202

Conread position: 113-274
Cow position: chr26:32353707-32353537 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 115-241
Cow position: chr26:23925622-23925498 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 110, 34

Conread position: 116-287
Cow position: chr26:7115368-7115190 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 134

Conread position: 122-313
Cow position: chr26:6823185-6823383 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 40

Conread position: 123-305
Cow position: chr26:10700878-10700688 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 180

Conread position: 124-285
Cow position: chr26:8341524-8341680 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 125-312
Cow position: chr26:8186910-8187095 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 30

Conread position: 127-219
Cow position: chr26:7254976-7254884 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 127-271
Cow position: chr26:12807269-12807122 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 80

Conread position: 127-274
Cow position: chr26:10608613-10608761 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 53

Conread position: 127-287
Cow position: chr26:6487760-6487593 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 127-287
Cow position: chr26:15132668-15132839 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 85

Conread position: 127-302
Cow position: chr26:7525172-7524998 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 25

Conread position: 128-255
Cow position: chr26:28410015-28410141 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 129-287
Cow position: chr26:13018356-13018204 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 96

Conread position: 129-312
Cow position: chr26:11884336-11884513 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 26

Conread position: 130-287
Cow position: chr26:3192409-3192249 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 61

Conread position: 130-287
Cow position: chr26:13705743-13705570 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 80

Conread position: 130-287
Cow position: chr26:25407426-25407580 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 52

Conread position: 130-304
Cow position: chr26:16585469-16585642 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 150, 92

Conread position: 130-304
Cow position: chr26:29901027-29900846 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 172

Conread position: 131-287
Cow position: chr26:21823010-21822849 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 69

Conread position: 132-287
Cow position: chr26:22176678-22176830 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 98

Conread position: 132-306
Cow position: chr26:23109065-23109247 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 12

Conread position: 135-287
Cow position: chr26:31382359-31382513 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 72

Conread position: 142-287
Cow position: chr26:17554570-17554421 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 17

Conread position: 142-293
Cow position: chr26:21319992-21320150 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 143-270
Cow position: chr26:5233021-5233148 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 143-271
Cow position: chr26:10502776-10502911 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 144-287
Cow position: chr26:29897235-29897382 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 138

Conread position: 148-305
Cow position: chr26:32503290-32503132 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 142

Conread position: 149-312
Cow position: chr26:14032380-14032227 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 67

Conread position: 158-305
Cow position: chr26:20846807-20846960 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 143

Conread position: 159-305
Cow position: chr26:26407727-26407576 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 137

Conread position: 161-287
Cow position: chr26:12891906-12891773 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 171-287
Cow position: chr26:13800585-13800708 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.