• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
End1-UMC-pd10en2-002-f05
        

               
Conread position:
               
1-189
               

               
Cow position:
               
chr4:24744521-24744337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:11331980-11332174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:66112185-66111994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr4:21232986-21232795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:16799300-16799101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 75
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:21257237-21257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
198, 22
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:17111989-17111782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:55395649-55395855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:46183298-46183514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:5460972-5460759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:12560918-12561143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:37704154-37704367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:69543071-69543285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:54927552-54927328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr4:36577742-36577514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr4:48396906-48396678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:38952440-38952666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:16593970-16594198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:62772037-62771804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:17052713-17052472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:19582729-19582499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:43865969-43865738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:45738592-45738356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:33433376-33433138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:36893245-36893479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:63096186-63095953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:9815460-9815225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:12903706-12903944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
227, 77
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:19098357-19098594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:44782261-44782496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:45367624-45367861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:45636052-45636288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:45644420-45644190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
214, 55
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:45662621-45662391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:46591553-46591790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
226, 87
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:58881075-58880840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:59377802-59378031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:65919501-65919730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:11380172-11380402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:11872020-11871795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
220, 40
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:51769001-51769225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:13974081-13973844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
221, 55
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:17084453-17084213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
231, 107
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:25537433-25537672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
160, 76
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:48173027-48173265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:48143718-48143969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:47348715-47348959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:33097088-33096841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
222, 63
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:19322194-19321935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:45073952-45074205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:68889669-68889422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:54190976-54191234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:63965101-63964839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
226, 54
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr4:53126006-53126259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
227, 26
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:13255976-13256229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:20157529-20157270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:21391925-21391667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:6653617-6653882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
222, 49
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:7571297-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:14500365-14500084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:15635561-15635287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
236, 63
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:37313057-37313334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:13693786-13693511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
242, 77
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:28836423-28836703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
219, 34
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:1499294-1499032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:12901666-12901385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
216, 26
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr4:34383455-34383166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr4:38935244-38935531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 105
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:213907-214184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
221, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:275351-275618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:1026337-1026064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:1419110-1419398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:2885654-2885372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
279, 83
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:3340839-3341129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:4084560-4084283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 42
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:7043935-7043643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:11099781-11099487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:12591323-12591045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:13026190-13026468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:13344434-13344710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:13668736-13668444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
226, 80
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:14414454-14414180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
279, 37
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:16881475-16881199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:17774466-17774191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:18756321-18756611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19118894-19119193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 84
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19316114-19315833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
209, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19435147-19435423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
242, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19597428-19597158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
279, 56
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19699994-19700281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:19744773-19745044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:20147073-20147359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
222, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:20327823-20327548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:21064924-21065199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
280, 25
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:21531756-21531466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
221, 44
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:22138343-22138042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:26323625-26323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
209, 105
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:26659192-26659474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
178, 31
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:29106794-29107085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 64
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:29291407-29291680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:30974228-30974508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
213, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:31136639-31136929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:31506144-31505844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:32259956-32259665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:34022699-34022412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
235, 76
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:34630781-34631081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:34641839-34641549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:35981881-35982172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:37915450-37915164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 108
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:38157203-38156919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 105
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:38946096-38946393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 107
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:41371053-41370767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
200, 77
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:44612892-44613179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
214, 69
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:48321914-48322211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:49794560-49794824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
279, 44
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:51851094-51851386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:53208182-53208457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 56
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:54455455-54455172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:54937777-54938054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 101
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:56590929-56591216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
223, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:65825963-65825650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:66172910-66172621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
181, 22
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:66256574-66256853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:66547879-66547589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
223, 25
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:68764409-68764693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr4:10732111-10732395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
221, 70
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr4:58248289-58248578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
215, 78
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr4:13941351-13941624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:3687811-3688109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
179, 55
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:12049133-12049404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr4:37732595-37732298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
231, 73
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr4:43740412-43740712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr4:52779740-52780026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
203, 65
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:68387679-68387970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:20027212-20026918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
220, 28
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:36929205-36929483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
279, 73
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:44449616-44449337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:56570695-56570978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
279, 81
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr4:51898895-51899209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 77
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr4:21874062-21874367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
221, 29
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:4321112-4320804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 295
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:19501196-19500897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
219, 12
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:23847160-23846860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:27530005-27530311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
241, 81
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:28839514-28839800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:31004519-31004221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
215, 69
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:34166089-34165794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:62471960-62472270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:68233862-68234153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:27276657-27276354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
226, 97
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:34700150-34699853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:37935396-37935107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
271, 74
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:59785206-59785512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:4319259-4318958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr4:22713602-22713298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
154, 64
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr4:29805480-29805176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
226, 69
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:12127748-12127441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:20125096-20124770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:46494184-46494495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:17186465-17186147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:18095782-18095486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:45249863-45250174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
219, 51
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:3283559-3283252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
270, 22
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:7430211-7430505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
169, 46
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:13327065-13326753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:16513632-16513326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:22546950-22546641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
222, 74
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:23445161-23444836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
221, 100
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:25197606-25197287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
216, 53
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:37691421-37691109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:68076641-68076336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr4:3421515-3421823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr4:19463384-19463534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:39128423-39128654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr4:8947282-8947518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr4:25888940-25888684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:1014957-1015245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:7964765-7964473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:12030736-12031023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:26333307-26333026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:26335474-26335193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:28772179-28771895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:33100925-33100633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:38944369-38944084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 75
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:68569763-68569470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr4:52748569-52748282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr4:19097178-19097479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
220, 21
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr4:22010176-22009872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:46526886-46527197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr4:62317334-62317644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr4:46258375-46258697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr4:20139627-20139429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr4:10378998-10379214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
187, 81
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr4:13222292-13222084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr4:19408110-19407877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:51784068-51784302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
226, 78
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:65265421-65265184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:14152978-14153230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr4:46456170-46455941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr4:33612469-33612232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr4:37675505-37675746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr4:12676695-12676969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr4:54171517-54171799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr4:59277586-59277300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
218, 38
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr4:40414738-40414435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
218, 20
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr4:47730746-47731059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr4:23509483-23509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
221, 105
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr4:9444797-9444480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr4:36290518-36290824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 68
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr4:20810-21018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr4:61066665-61066940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
276, 84
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr4:24002075-24001870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr4:3850444-3850670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:11194076-11194308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr4:4085229-4084952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr4:45775448-45775158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr4:85582-85868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr4:22101368-22101087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr4:49158892-49158618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
238, 45
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr4:51727968-51728254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr4:61897644-61897372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr4:65172981-65173282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr4:52832126-52831821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
217, 32
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr4:34369560-34369263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr4:46136644-46136923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 70
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr4:30778935-30778633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
8-305
               

               
Cow position:
               
chr4:48104670-48104370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
212, 48
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr4:54111645-54111896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr4:48409373-48409085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr4:69455727-69455454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr4:62983655-62983386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr4:47510290-47510506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr4:21874710-21874925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr4:44184210-44183946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 55
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr4:45563645-45563849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
16-278
               

               
Cow position:
               
chr4:19430263-19430528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr4:46566571-46566297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr4:46477048-46476834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-242
               

               
Cow position:
               
chr4:34503197-34503418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr4:32693689-32693975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr4:45799779-45800083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
19-257
               

               
Cow position:
               
chr4:7808481-7808709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
202, 7
               

               
Conread position:
               
21-255
               

               
Cow position:
               
chr4:48961579-48961350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr4:44773138-44772852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
21-306
               

               
Cow position:
               
chr4:19102977-19102684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr4:53100707-53100901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr4:54524427-54524226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr4:48152462-48152199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
197, 56
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr4:52823500-52823229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr4:10915934-10915658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr4:22842250-22842507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
22-301
               

               
Cow position:
               
chr4:33970995-33970718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
22-303
               

               
Cow position:
               
chr4:42423898-42423615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
209, 66
               

               
Conread position:
               
22-306
               

               
Cow position:
               
chr4:20184616-20184879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
23-221
               

               
Cow position:
               
chr4:24481760-24481572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr4:9122-8922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
23-287
               

               
Cow position:
               
chr4:44903194-44903458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr4:508998-508719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr4:19292631-19292885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr4:61188957-61188752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr4:49826166-49826378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr4:66136691-66136505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr4:48422792-48423042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
250, 48
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr4:34562302-34562541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr4:60719022-60719266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
36-312
               

               
Cow position:
               
chr4:33181457-33181747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
37-229
               

               
Cow position:
               
chr4:20505158-20504976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr4:19323896-19324096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
38-287
               

               
Cow position:
               
chr4:53134517-53134771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
39-215
               

               
Cow position:
               
chr4:61478527-61478700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
39-287
               

               
Cow position:
               
chr4:8182714-8182460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chr4:19493480-19493682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr4:34509766-34510030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
240, 36
               

               
Conread position:
               
43-287
               

               
Cow position:
               
chr4:48485922-48486170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr4:39984331-39984522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr4:26012333-26012517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
50-246
               

               
Cow position:
               
chr4:26830639-26830832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr4:10851513-10851266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr4:28701291-28701540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr4:36517549-36517297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
54-240
               

               
Cow position:
               
chr4:65131514-65131334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr4:46435268-46435508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
168, 31
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr4:19431747-19431573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
159, 21
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr4:21161049-21161279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
74-287
               

               
Cow position:
               
chr4:45874509-45874289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr4:44854337-44854085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
81-242
               

               
Cow position:
               
chr4:65650174-65650013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr4:7698231-7698439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr4:31177791-31177996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr4:50687896-50687691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
81-306
               

               
Cow position:
               
chr4:25370070-25370286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
82-223
               

               
Cow position:
               
chr4:5964032-5963887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
83-217
               

               
Cow position:
               
chr4:64040078-64040212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
83-241
               

               
Cow position:
               
chr4:54921129-54920967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
83-246
               

               
Cow position:
               
chr4:51920500-51920672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr4:65463541-65463311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
143, 47
               

               
Conread position:
               
85-271
               

               
Cow position:
               
chr4:60141558-60141367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
85-279
               

               
Cow position:
               
chr4:3268404-3268205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr4:386423-386224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
85-286
               

               
Cow position:
               
chr4:69169606-69169822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr4:20142007-20141814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
85-293
               

               
Cow position:
               
chr4:37991559-37991769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
85-308
               

               
Cow position:
               
chr4:19578351-19578581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
86-223
               

               
Cow position:
               
chr4:16221916-16221774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr4:56239899-56239701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
90-230
               

               
Cow position:
               
chr4:61704897-61704754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
90-287
               

               
Cow position:
               
chr4:69290777-69290567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
91-312
               

               
Cow position:
               
chr4:14131403-14131626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
92-287
               

               
Cow position:
               
chr4:60527148-60527355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 180
               

               
Conread position:
               
93-271
               

               
Cow position:
               
chr4:43916257-43916447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
95-286
               

               
Cow position:
               
chr4:33910246-33910432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr4:26901298-26901507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
98-242
               

               
Cow position:
               
chr4:1845-1993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
98-270
               

               
Cow position:
               
chr4:62920893-62920720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
98-285
               

               
Cow position:
               
chr4:38210001-38209803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-287
               

               
Cow position:
               
chr4:34653895-34653701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
98-287
               

               
Cow position:
               
chr4:54478944-54478740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr4:21112593-21112393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
98-304
               

               
Cow position:
               
chr4:29384258-29384051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
99-228
               

               
Cow position:
               
chr4:42176499-42176367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
99-237
               

               
Cow position:
               
chr4:10472164-10472308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
99-242
               

               
Cow position:
               
chr4:12441870-12442016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
99-242
               

               
Cow position:
               
chr4:13241600-13241746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
99-242
               

               
Cow position:
               
chr4:48381356-48381500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
99-242
               

               
Cow position:
               
chr4:60443065-60442921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
99-243
               

               
Cow position:
               
chr4:54541663-54541516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
99-243
               

               
Cow position:
               
chr4:58305930-58305788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
99-246
               

               
Cow position:
               
chr4:63117664-63117515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-274
               

               
Cow position:
               
chr4:46404929-46404748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr4:17851278-17851086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr4:21506981-21506792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr4:46550355-46550563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 196
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr4:60303040-60302841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
99-293
               

               
Cow position:
               
chr4:68805987-68806183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
99-305
               

               
Cow position:
               
chr4:68590752-68590964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
99-312
               

               
Cow position:
               
chr4:19333361-19333591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
100-241
               

               
Cow position:
               
chr4:19542114-19542257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr4:15236612-15236798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr4:19089870-19090061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr4:46050024-46049844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
101-286
               

               
Cow position:
               
chr4:33838823-33838630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr4:10558513-10558710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 186
               

               
Conread position:
               
102-236
               

               
Cow position:
               
chr4:36744558-36744694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
102-236
               

               
Cow position:
               
chr4:65179172-65179031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
102-257
               

               
Cow position:
               
chr4:12135949-12135790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr4:19539259-19539059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr4:17051309-17051110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr4:18099084-18098887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr4:47305055-47305255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr4:59002161-59001964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr4:4150032-4150241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr4:5727822-5728034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
103-287
               

               
Cow position:
               
chr4:60506255-60506450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
122, 186
               

               
Conread position:
               
103-300
               

               
Cow position:
               
chr4:23600146-23600354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
104-234
               

               
Cow position:
               
chr4:49800674-49800804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
104-241
               

               
Cow position:
               
chr4:45583139-45583000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
104-242
               

               
Cow position:
               
chr4:15462273-15462129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
104-243
               

               
Cow position:
               
chr4:45706023-45706161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
104-246
               

               
Cow position:
               
chr4:27699012-27699159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
104-268
               

               
Cow position:
               
chr4:45626647-45626478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr4:23646869-23646698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr4:42232043-42231859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr4:60363330-60363526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr4:12004198-12004406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr4:46560160-46560366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
105-223
               

               
Cow position:
               
chr4:50676189-50676070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
105-233
               

               
Cow position:
               
chr4:22196230-22196103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
105-237
               

               
Cow position:
               
chr4:53346307-53346448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
105-278
               

               
Cow position:
               
chr4:34983515-34983339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
105-285
               

               
Cow position:
               
chr4:35638922-35638733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr4:39007489-39007671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr4:64029098-64029267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
105-287
               

               
Cow position:
               
chr4:67393072-67393269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr4:55508263-55508101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr4:29318092-29317897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
108-287
               

               
Cow position:
               
chr4:61391243-61391060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
109-269
               

               
Cow position:
               
chr4:61268176-61268344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
109-299
               

               
Cow position:
               
chr4:61608980-61608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
109-304
               

               
Cow position:
               
chr4:19496479-19496690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 202
               

               
Conread position:
               
110-287
               

               
Cow position:
               
chr4:41907596-41907408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
111-223
               

               
Cow position:
               
chr4:63459236-63459120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
115-285
               

               
Cow position:
               
chr4:32790012-32789844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr4:42374160-42373955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
117-246
               

               
Cow position:
               
chr4:54650492-54650360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
117-285
               

               
Cow position:
               
chr4:47048113-47048286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
117-286
               

               
Cow position:
               
chr4:561625-561804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr4:30690999-30691176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
124-287
               

               
Cow position:
               
chr4:54501019-54500870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr4:22849487-22849328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
126-267
               

               
Cow position:
               
chr4:1775438-1775305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr4:28854268-28854102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
127-285
               

               
Cow position:
               
chr4:56410352-56410517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
127-286
               

               
Cow position:
               
chr4:61887643-61887813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr4:32601844-32602000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr4:39010056-39010228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr4:51083331-51083145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 89
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr4:22482329-22482514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
128-243
               

               
Cow position:
               
chr4:32353440-32353323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
128-274
               

               
Cow position:
               
chr4:21275593-21275450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
128-285
               

               
Cow position:
               
chr4:12052319-12052165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
128-287
               

               
Cow position:
               
chr4:3519429-3519593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
128-287
               

               
Cow position:
               
chr4:50494779-50494953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
128-312
               

               
Cow position:
               
chr4:27656985-27657170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
129-243
               

               
Cow position:
               
chr4:1236864-1236751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
129-260
               

               
Cow position:
               
chr4:51708074-51708204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
129-266
               

               
Cow position:
               
chr4:5047137-5047000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-284
               

               
Cow position:
               
chr4:20164684-20164527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
129-284
               

               
Cow position:
               
chr4:42044966-42044803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
129-285
               

               
Cow position:
               
chr4:13508232-13508067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr4:12867114-12867274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 5
               

               
Conread position:
               
129-287
               

               
Cow position:
               
chr4:30769044-30769206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
129-302
               

               
Cow position:
               
chr4:61969717-61969535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
129-305
               

               
Cow position:
               
chr4:11506774-11506598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
130-242
               

               
Cow position:
               
chr4:11512699-11512588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
130-242
               

               
Cow position:
               
chr4:32272963-32272853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-287
               

               
Cow position:
               
chr4:34919261-34919100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
130-287
               

               
Cow position:
               
chr4:44681242-44681086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
130-308
               

               
Cow position:
               
chr4:66168323-66168139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
131-242
               

               
Cow position:
               
chr4:46761618-46761729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-242
               

               
Cow position:
               
chr4:65805906-65806017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-243
               

               
Cow position:
               
chr4:21533085-21532971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 85
               

               
Conread position:
               
131-246
               

               
Cow position:
               
chr4:33870085-33870202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
131-267
               

               
Cow position:
               
chr4:479781-479640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
131-279
               

               
Cow position:
               
chr4:29842837-29842984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
131-286
               

               
Cow position:
               
chr4:51026357-51026524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr4:8083787-8083634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
149, 94
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr4:33360115-33360267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
131-299
               

               
Cow position:
               
chr4:13141085-13140917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
133-279
               

               
Cow position:
               
chr4:53380700-53380856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
133-285
               

               
Cow position:
               
chr4:55694187-55694342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr4:21554073-21553918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr4:45840411-45840566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr4:61286557-61286717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
133-312
               

               
Cow position:
               
chr4:56805189-56805373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
134-303
               

               
Cow position:
               
chr4:22215497-22215322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
135-287
               

               
Cow position:
               
chr4:59015603-59015754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
137-303
               

               
Cow position:
               
chr4:66412204-66412372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
138-242
               

               
Cow position:
               
chr4:51630800-51630903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
138-285
               

               
Cow position:
               
chr4:28660533-28660374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
138-287
               

               
Cow position:
               
chr4:30943972-30944128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr4:36070720-36070899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
140-287
               

               
Cow position:
               
chr4:66122347-66122195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr4:39569226-39569377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
141-239
               

               
Cow position:
               
chr4:19580734-19580637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
141-242
               

               
Cow position:
               
chr4:48321501-48321402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
141-286
               

               
Cow position:
               
chr4:54785908-54785757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
141-287
               

               
Cow position:
               
chr4:40392836-40392985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
141-287
               

               
Cow position:
               
chr4:51617978-51617822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
141-305
               

               
Cow position:
               
chr4:43579392-43579224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr4:65291834-65291689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr4:22331146-22331314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 137
               

               
Conread position:
               
143-271
               

               
Cow position:
               
chr4:13193987-13194119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
143-287
               

               
Cow position:
               
chr4:62794341-62794182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
143-305
               

               
Cow position:
               
chr4:61524455-61524625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
144-287
               

               
Cow position:
               
chr4:25929240-25929383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 101
               

               
Conread position:
               
145-287
               

               
Cow position:
               
chr4:56395537-56395690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
145-304
               

               
Cow position:
               
chr4:38940918-38940752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
149-242
               

               
Cow position:
               
chr4:28570126-28570219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-271
               

               
Cow position:
               
chr4:12716867-12716740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr4:20153520-20153360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr4:12713998-12713830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 143
               

               
Conread position:
               
150-285
               

               
Cow position:
               
chr4:2770103-2770243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
153-311
               

               
Cow position:
               
chr4:56513975-56513816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr4:12748380-12748217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
155-270
               

               
Cow position:
               
chr4:27425746-27425865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
156-287
               

               
Cow position:
               
chr4:12908409-12908543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
156-287
               

               
Cow position:
               
chr4:66509673-66509800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
157-287
               

               
Cow position:
               
chr4:42608776-42608913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
157-287
               

               
Cow position:
               
chr4:59608148-59608022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
157-312
               

               
Cow position:
               
chr4:30250234-30250076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
118, 93
               

               
Conread position:
               
157-312
               

               
Cow position:
               
chr4:63293496-63293658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
159-300
               

               
Cow position:
               
chr4:59105644-59105498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
162-287
               

               
Cow position:
               
chr4:19496944-19496805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
162-287
               

               
Cow position:
               
chr4:19503970-19504096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
162-312
               

               
Cow position:
               
chr4:14964870-14965016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
168-287
               

               
Cow position:
               
chr4:68358378-68358500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
169-287
               

               
Cow position:
               
chr4:49880646-49880531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 56
               
Show alignments to all cow chromosomes.