Cow genome map

Conread name: End1-UMC-pd10en2-002-f05

Conread position: 1-170
Cow position: chr5:34638805-34638967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-200
Cow position: chr5:65883852-65883659 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-206
Cow position: chr5:32696900-32696704 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-209
Cow position: chr5:65588624-65588821 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-210
Cow position: chr5:67540282-67540078 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-214
Cow position: chr5:42744709-42744907 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-223
Cow position: chr5:14473492-14473267 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 76

Conread position: 1-223
Cow position: chr5:20422263-20422057 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-223
Cow position: chr5:43992243-43992460 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 1-223
Cow position: chr5:47323386-47323598 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 74

Conread position: 1-223
Cow position: chr5:63987524-63987310 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 32

Conread position: 1-225
Cow position: chr5:56680170-56680394 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 160, 64

Conread position: 1-230
Cow position: chr5:6045212-6045439 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 107

Conread position: 1-230
Cow position: chr5:14629892-14629663 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 182, 107

Conread position: 1-232
Cow position: chr5:5111154-5110924 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 183, 76

Conread position: 1-232
Cow position: chr5:50533466-50533241 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 129, 100

Conread position: 1-234
Cow position: chr5:13717646-13717424 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 1-234
Cow position: chr5:46322889-46322656 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 98, 51

Conread position: 1-234
Cow position: chr5:48009928-48009711 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 64

Conread position: 1-234
Cow position: chr5:54767988-54767762 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 1-236
Cow position: chr5:54086464-54086687 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 69

Conread position: 1-237
Cow position: chr5:4032071-4031836 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 160, 99

Conread position: 1-237
Cow position: chr5:7697926-7698150 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 63

Conread position: 1-237
Cow position: chr5:41294002-41294231 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 211, 78

Conread position: 1-237
Cow position: chr5:53710769-53710539 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 1-237
Cow position: chr5:54375586-54375352 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 129, 80

Conread position: 1-237
Cow position: chr5:57575690-57575925 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 84

Conread position: 1-239
Cow position: chr5:15479047-15479277 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-239
Cow position: chr5:31640341-31640577 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 121

Conread position: 1-240
Cow position: chr5:37808748-37808512 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 44

Conread position: 1-241
Cow position: chr5:23678781-23678549 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 126, 76

Conread position: 1-241
Cow position: chr5:45273579-45273350 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-241
Cow position: chr5:58446724-58446960 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 83

Conread position: 1-242
Cow position: chr5:26477091-26476863 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1-242
Cow position: chr5:43929816-43929579 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 129, 31

Conread position: 1-242
Cow position: chr5:44752390-44752152 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 40

Conread position: 1-242
Cow position: chr5:44994117-44993894 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-242
Cow position: chr5:49440951-49440714 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 213, 31

Conread position: 1-242
Cow position: chr5:50821703-50821938 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 1-242
Cow position: chr5:53855619-53855861 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 123, 75

Conread position: 1-242
Cow position: chr5:54060198-54060433 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 57

Conread position: 1-242
Cow position: chr5:55019216-55019448 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 226, 47

Conread position: 1-242
Cow position: chr5:58856025-58856257 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 1-242
Cow position: chr5:64321673-64321903 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 77

Conread position: 1-242
Cow position: chr5:65776461-65776227 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 206, 63

Conread position: 1-243
Cow position: chr5:34300837-34301072 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 176, 71

Conread position: 1-243
Cow position: chr5:64592173-64591939 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 1-245
Cow position: chr5:28927668-28927436 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 131, 80

Conread position: 1-246
Cow position: chr5:16206234-16205994 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 76

Conread position: 1-246
Cow position: chr5:44726405-44726178 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 72

Conread position: 1-246
Cow position: chr5:59873170-59872921 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 89

Conread position: 1-250
Cow position: chr5:45574536-45574783 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 1-255
Cow position: chr5:62142592-62142846 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 20

Conread position: 1-258
Cow position: chr5:53842204-53842468 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 78

Conread position: 1-267
Cow position: chr5:42845677-42845405 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 102

Conread position: 1-267
Cow position: chr5:62172337-62172590 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-267
Cow position: chr5:72564683-72564937 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 1-268
Cow position: chr5:71494741-71495011 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 218, 36

Conread position: 1-271
Cow position: chr5:69731428-69731681 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 268, 31

Conread position: 1-272
Cow position: chr5:66339000-66339262 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 182, 60

Conread position: 1-274
Cow position: chr5:35684859-35685133 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 221, 22

Conread position: 1-277
Cow position: chr5:36855126-36855393 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 80

Conread position: 1-278
Cow position: chr5:54350442-54350172 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-278
Cow position: chr5:72895608-72895885 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 40

Conread position: 1-279
Cow position: chr5:47601740-47602008 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 240, 69

Conread position: 1-279
Cow position: chr5:64176196-64175930 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 44

Conread position: 1-284
Cow position: chr5:12322880-12322605 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 211, 43

Conread position: 1-284
Cow position: chr5:35247188-35246902 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 219, 16

Conread position: 1-285
Cow position: chr5:16025536-16025276 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 279, 31

Conread position: 1-285
Cow position: chr5:16179603-16179316 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 16

Conread position: 1-285
Cow position: chr5:43858512-43858211 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 40

Conread position: 1-285
Cow position: chr5:50722970-50723255 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 219, 57

Conread position: 1-285
Cow position: chr5:56070777-56071065 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 221, 106

Conread position: 1-285
Cow position: chr5:64523946-64523657 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 54

Conread position: 1-286
Cow position: chr5:35459375-35459088 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 166, 80

Conread position: 1-286
Cow position: chr5:57935188-57934912 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 80

Conread position: 1-286
Cow position: chr5:65752778-65753068 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 126, 75

Conread position: 1-287
Cow position: chr5:991387-991683 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 172, 67

Conread position: 1-287
Cow position: chr5:3771769-3772051 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 226, 84

Conread position: 1-287
Cow position: chr5:7057479-7057188 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 219, 78

Conread position: 1-287
Cow position: chr5:8024274-8024006 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 1-287
Cow position: chr5:9894208-9893916 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 109

Conread position: 1-287
Cow position: chr5:11668264-11667975 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 74

Conread position: 1-287
Cow position: chr5:17087104-17086808 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 52

Conread position: 1-287
Cow position: chr5:17555110-17554826 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 149, 9

Conread position: 1-287
Cow position: chr5:18289051-18289327 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 224, 80

Conread position: 1-287
Cow position: chr5:19752226-19752510 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 44

Conread position: 1-287
Cow position: chr5:21828787-21829073 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 74

Conread position: 1-287
Cow position: chr5:22242853-22242565 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 31

Conread position: 1-287
Cow position: chr5:26262752-26262476 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 127, 7

Conread position: 1-287
Cow position: chr5:26377748-26377471 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 116, 76

Conread position: 1-287
Cow position: chr5:28224375-28224651 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 277, 76

Conread position: 1-287
Cow position: chr5:29827970-29828257 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 219, 76

Conread position: 1-287
Cow position: chr5:30276618-30276896 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 226, 63

Conread position: 1-287
Cow position: chr5:30302814-30303090 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 63

Conread position: 1-287
Cow position: chr5:32394522-32394811 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 219, 44

Conread position: 1-287
Cow position: chr5:33560812-33560529 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 243, 76

Conread position: 1-287
Cow position: chr5:33833965-33834249 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 219, 78

Conread position: 1-287
Cow position: chr5:34050037-34050317 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 279, 80

Conread position: 1-287
Cow position: chr5:35976442-35976703 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 279, 31

Conread position: 1-287
Cow position: chr5:36039083-36038796 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 34

Conread position: 1-287
Cow position: chr5:39937028-39937326 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 100, 9

Conread position: 1-287
Cow position: chr5:40152399-40152696 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 63

Conread position: 1-287
Cow position: chr5:42050472-42050753 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 220, 42

Conread position: 1-287
Cow position: chr5:42064124-42064416 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 87

Conread position: 1-287
Cow position: chr5:44446947-44446666 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 76

Conread position: 1-287
Cow position: chr5:46512842-46512559 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 221, 65

Conread position: 1-287
Cow position: chr5:47696521-47696251 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 127, 30

Conread position: 1-287
Cow position: chr5:50599977-50600255 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 49

Conread position: 1-287
Cow position: chr5:52165257-52164964 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 223, 78

Conread position: 1-287
Cow position: chr5:53835634-53835930 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 128, 80

Conread position: 1-287
Cow position: chr5:53946816-53947108 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 76

Conread position: 1-287
Cow position: chr5:55966958-55966664 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 77

Conread position: 1-287
Cow position: chr5:56877408-56877679 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 162, 26

Conread position: 1-287
Cow position: chr5:66257560-66257843 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 9

Conread position: 1-287
Cow position: chr5:66972349-66972639 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 127, 74

Conread position: 1-287
Cow position: chr5:67932543-67932257 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 223, 47

Conread position: 1-287
Cow position: chr5:68718794-68719076 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 32

Conread position: 1-287
Cow position: chr5:69337750-69338023 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 23

Conread position: 1-287
Cow position: chr5:70270786-70271076 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 28

Conread position: 1-287
Cow position: chr5:71845999-71845717 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 87

Conread position: 1-287
Cow position: chr5:72951762-72952033 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 128, 63

Conread position: 1-287
Cow position: chr5:74643750-74643475 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 124, 68

Conread position: 1-291
Cow position: chr5:69461255-69461545 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 162, 32

Conread position: 1-292
Cow position: chr5:15598312-15598031 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 216, 45

Conread position: 1-293
Cow position: chr5:5257372-5257072 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 49

Conread position: 1-293
Cow position: chr5:12434456-12434750 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 77, 26

Conread position: 1-293
Cow position: chr5:20127977-20128269 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 219, 34

Conread position: 1-294
Cow position: chr5:70951955-70951677 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 63

Conread position: 1-296
Cow position: chr5:55942475-55942159 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 82, 59

Conread position: 1-298
Cow position: chr5:6286503-6286227 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 270, 47

Conread position: 1-299
Cow position: chr5:14550660-14550361 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 219, 76

Conread position: 1-300
Cow position: chr5:29903597-29903321 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 279, 69

Conread position: 1-300
Cow position: chr5:57101853-57101567 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 32

Conread position: 1-300
Cow position: chr5:60016088-60016386 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 226, 80

Conread position: 1-301
Cow position: chr5:30949995-30949699 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 128, 42

Conread position: 1-302
Cow position: chr5:21617379-21617678 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 6

Conread position: 1-302
Cow position: chr5:65941329-65941027 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 40

Conread position: 1-303
Cow position: chr5:26990313-26990605 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 280, 84

Conread position: 1-303
Cow position: chr5:35826524-35826824 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 128, 56

Conread position: 1-303
Cow position: chr5:64139487-64139781 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 217, 53

Conread position: 1-304
Cow position: chr5:30232820-30233139 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 113

Conread position: 1-304
Cow position: chr5:32339043-32338731 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 137, 40

Conread position: 1-306
Cow position: chr5:16893851-16893547 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 128, 12

Conread position: 1-306
Cow position: chr5:28302826-28302524 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 31

Conread position: 1-306
Cow position: chr5:37645995-37646301 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 156, 55

Conread position: 1-308
Cow position: chr5:7044786-7044468 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 77

Conread position: 1-308
Cow position: chr5:11229748-11229438 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 183, 63

Conread position: 1-308
Cow position: chr5:17063169-17062851 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 77, 105

Conread position: 1-308
Cow position: chr5:30253662-30253974 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 78

Conread position: 1-308
Cow position: chr5:35763196-35763477 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 287, 74

Conread position: 1-308
Cow position: chr5:43402821-43403142 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 83

Conread position: 1-310
Cow position: chr5:45397499-45397799 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 151, 35

Conread position: 1-311
Cow position: chr5:14314446-14314752 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 116

Conread position: 1-311
Cow position: chr5:55756504-55756177 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 70, 109

Conread position: 1-312
Cow position: chr5:12901838-12902157 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 84, 64

Conread position: 1-312
Cow position: chr5:16214605-16214913 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 242, 116

Conread position: 1-312
Cow position: chr5:30845034-30845341 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 215, 28

Conread position: 1-312
Cow position: chr5:49474624-49474317 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 1-312
Cow position: chr5:50575706-50576005 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 279, 78

Conread position: 1-312
Cow position: chr5:57768061-57767751 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 67

Conread position: 1-312
Cow position: chr5:62638828-62639118 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 279, 70

Conread position: 2-223
Cow position: chr5:29912341-29912556 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 151, 30

Conread position: 2-242
Cow position: chr5:458413-458647 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 223, 73

Conread position: 2-242
Cow position: chr5:19523822-19524055 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 2-242
Cow position: chr5:51935114-51935344 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 2-246
Cow position: chr5:34887272-34887036 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 43

Conread position: 2-282
Cow position: chr5:65343534-65343831 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 99

Conread position: 2-284
Cow position: chr5:25366013-25366305 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 111

Conread position: 2-285
Cow position: chr5:29681003-29681302 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 2-287
Cow position: chr5:3242554-3242286 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 76

Conread position: 2-287
Cow position: chr5:14921008-14920717 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 220, 51

Conread position: 2-287
Cow position: chr5:26097218-26097499 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 218, 31

Conread position: 2-287
Cow position: chr5:26467545-26467836 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 161, 99

Conread position: 2-287
Cow position: chr5:34561934-34562218 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 53, 106

Conread position: 2-287
Cow position: chr5:38833045-38833323 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 124, 30

Conread position: 2-287
Cow position: chr5:43390954-43391235 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 6

Conread position: 2-287
Cow position: chr5:47756698-47756981 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 218, 21

Conread position: 2-287
Cow position: chr5:52667953-52668248 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 156

Conread position: 2-287
Cow position: chr5:57327719-57328006 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 68

Conread position: 2-287
Cow position: chr5:62107569-62107275 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 69

Conread position: 2-287
Cow position: chr5:66551977-66551683 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 147, 75

Conread position: 2-299
Cow position: chr5:24349030-24349312 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 291, 75

Conread position: 2-300
Cow position: chr5:34976922-34976617 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 77

Conread position: 2-303
Cow position: chr5:41165008-41165306 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 75

Conread position: 2-303
Cow position: chr5:65967806-65967508 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 223, 34

Conread position: 2-307
Cow position: chr5:36650472-36650787 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 84

Conread position: 2-312
Cow position: chr5:63647552-63647240 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 71

Conread position: 3-219
Cow position: chr5:15426452-15426670 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 126, 74

Conread position: 3-230
Cow position: chr5:20783547-20783766 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 29

Conread position: 3-237
Cow position: chr5:64758848-64758617 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 103

Conread position: 3-248
Cow position: chr5:37646625-37646379 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 116

Conread position: 3-257
Cow position: chr5:55176813-55177059 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 74

Conread position: 3-263
Cow position: chr5:60183724-60183984 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 137, 73

Conread position: 3-287
Cow position: chr5:12557369-12557078 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 86

Conread position: 3-287
Cow position: chr5:41010070-41009801 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 198, 22

Conread position: 3-287
Cow position: chr5:44796808-44796527 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 52

Conread position: 3-287
Cow position: chr5:45845769-45845481 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 127, 29

Conread position: 3-287
Cow position: chr5:51053725-51053439 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 20

Conread position: 3-287
Cow position: chr5:57756108-57755825 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 219, 88

Conread position: 3-288
Cow position: chr5:45225901-45225610 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 160

Conread position: 3-295
Cow position: chr5:15722143-15721871 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 3-300
Cow position: chr5:30629235-30628931 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 167, 40

Conread position: 3-300
Cow position: chr5:57419868-57419574 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 230, 45

Conread position: 3-312
Cow position: chr5:57074411-57074100 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 4-246
Cow position: chr5:37190171-37189938 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 213, 65

Conread position: 4-266
Cow position: chr5:30805092-30805345 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 223, 52

Conread position: 4-287
Cow position: chr5:55955831-55956119 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 73

Conread position: 5-236
Cow position: chr5:8821088-8820864 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 30

Conread position: 5-242
Cow position: chr5:63427082-63426847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 80

Conread position: 5-274
Cow position: chr5:11427310-11427038 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 173, 76

Conread position: 5-287
Cow position: chr5:56014659-56014931 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 275, 18

Conread position: 5-293
Cow position: chr5:24996298-24996006 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 216, 73

Conread position: 5-294
Cow position: chr5:35208188-35208479 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 71

Conread position: 7-279
Cow position: chr5:64140462-64140738 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 16

Conread position: 8-303
Cow position: chr5:63234898-63234598 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 219, 77

Conread position: 9-221
Cow position: chr5:29771446-29771662 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 17

Conread position: 9-240
Cow position: chr5:41545965-41545740 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 9-242
Cow position: chr5:46509938-46509709 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 209, 51

Conread position: 9-287
Cow position: chr5:6439104-6438816 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 36

Conread position: 9-287
Cow position: chr5:44848091-44847818 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 234, 68

Conread position: 10-223
Cow position: chr5:67212286-67212496 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 70

Conread position: 10-269
Cow position: chr5:44028375-44028115 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 204, 67

Conread position: 10-301
Cow position: chr5:41713228-41713513 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 120, 7

Conread position: 10-306
Cow position: chr5:12247817-12247514 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 55

Conread position: 10-308
Cow position: chr5:31475614-31475917 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 196, 67

Conread position: 12-220
Cow position: chr5:45803991-45804193 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 52

Conread position: 13-214
Cow position: chr5:26150488-26150294 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 70

Conread position: 13-242
Cow position: chr5:23168896-23168671 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 13-287
Cow position: chr5:1247196-1247472 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 207, 95

Conread position: 13-287
Cow position: chr5:4280381-4280653 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 214, 64

Conread position: 14-306
Cow position: chr5:40109425-40109715 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 71

Conread position: 16-234
Cow position: chr5:74015876-74016087 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 61

Conread position: 16-287
Cow position: chr5:20288326-20288049 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 195, 7

Conread position: 16-300
Cow position: chr5:41935715-41935433 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 157, 17

Conread position: 17-208
Cow position: chr5:58793672-58793486 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 17-220
Cow position: chr5:1461024-1461222 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 17-220
Cow position: chr5:63150232-63150036 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 54

Conread position: 17-287
Cow position: chr5:59627037-59626763 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 212, 91

Conread position: 17-312
Cow position: chr5:20843463-20843160 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 93

Conread position: 19-287
Cow position: chr5:34624896-34625157 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 69

Conread position: 20-288
Cow position: chr5:45472220-45472488 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 58

Conread position: 22-278
Cow position: chr5:61455787-61456042 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 195, 55

Conread position: 22-285
Cow position: chr5:56524111-56524369 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 108, 42

Conread position: 22-286
Cow position: chr5:29353192-29352924 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 106, 57

Conread position: 22-287
Cow position: chr5:63240918-63241188 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 202, 55

Conread position: 22-287
Cow position: chr5:72006550-72006288 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 11

Conread position: 22-312
Cow position: chr5:66366449-66366735 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 48

Conread position: 23-229
Cow position: chr5:63992231-63992030 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 59

Conread position: 23-237
Cow position: chr5:40241985-40242194 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 95

Conread position: 23-245
Cow position: chr5:25231067-25230859 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 201, 72

Conread position: 23-246
Cow position: chr5:6503940-6503724 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 23-287
Cow position: chr5:61725911-61726166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 27

Conread position: 23-308
Cow position: chr5:39447593-39447292 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 174, 38

Conread position: 25-293
Cow position: chr5:43923213-43922956 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 52

Conread position: 27-241
Cow position: chr5:24136660-24136870 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 192, 50

Conread position: 27-246
Cow position: chr5:57156367-57156155 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 95, 36

Conread position: 31-242
Cow position: chr5:56339069-56338866 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 33-285
Cow position: chr5:63192789-63192547 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 47

Conread position: 36-223
Cow position: chr5:56517058-56517240 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 41

Conread position: 36-230
Cow position: chr5:56153570-56153758 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 36-243
Cow position: chr5:67118374-67118574 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 36-312
Cow position: chr5:15470888-15471155 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 253, 40

Conread position: 38-242
Cow position: chr5:56211859-56212061 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 71

Conread position: 38-287
Cow position: chr5:12654942-12654700 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 83

Conread position: 39-242
Cow position: chr5:49342090-49341894 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 39-287
Cow position: chr5:69099677-69099928 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 150, 38

Conread position: 39-292
Cow position: chr5:17602242-17601990 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 183, 31

Conread position: 40-221
Cow position: chr5:35982781-35982603 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 67

Conread position: 40-287
Cow position: chr5:6528635-6528873 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 56

Conread position: 40-287
Cow position: chr5:66530877-66531121 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 178, 24

Conread position: 41-232
Cow position: chr5:61102675-61102861 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 41-260
Cow position: chr5:52083297-52083514 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 36

Conread position: 41-274
Cow position: chr5:71724261-71724484 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 45-301
Cow position: chr5:57686776-57686517 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 63

Conread position: 50-265
Cow position: chr5:7193387-7193599 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 173, 35

Conread position: 50-287
Cow position: chr5:8736320-8736068 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 117

Conread position: 50-287
Cow position: chr5:22795183-22795415 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 26

Conread position: 52-237
Cow position: chr5:67243891-67244068 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 18

Conread position: 66-242
Cow position: chr5:58555120-58555292 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 154, 42

Conread position: 67-307
Cow position: chr5:17104839-17105077 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 170, 14

Conread position: 69-308
Cow position: chr5:60523721-60523956 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 154, 10

Conread position: 70-287
Cow position: chr5:15363864-15364079 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 15

Conread position: 70-287
Cow position: chr5:22667061-22667279 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 157, 30

Conread position: 70-287
Cow position: chr5:26549158-26548934 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 60, 28

Conread position: 70-287
Cow position: chr5:46541067-46540851 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 152, 8

Conread position: 72-285
Cow position: chr5:49501839-49501611 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 18

Conread position: 75-243
Cow position: chr5:9234004-9233832 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 25

Conread position: 78-285
Cow position: chr5:42670884-42670666 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 101

Conread position: 79-301
Cow position: chr5:48867468-48867246 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 164, 29

Conread position: 79-312
Cow position: chr5:59627090-59627329 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 15

Conread position: 80-242
Cow position: chr5:9170594-9170429 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 101

Conread position: 80-285
Cow position: chr5:4267658-4267867 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 152

Conread position: 80-287
Cow position: chr5:33273684-33273906 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 65

Conread position: 80-287
Cow position: chr5:36838957-36839156 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 200, 22

Conread position: 80-304
Cow position: chr5:69383242-69383476 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 225

Conread position: 81-220
Cow position: chr5:60188979-60189126 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 81-224
Cow position: chr5:45574377-45574229 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 144

Conread position: 81-241
Cow position: chr5:62378775-62378934 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 9

Conread position: 81-242
Cow position: chr5:61875530-61875694 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 8, 33

Conread position: 81-260
Cow position: chr5:55068693-55068887 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 81-269
Cow position: chr5:56334521-56334330 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 80

Conread position: 81-287
Cow position: chr5:60515030-60514816 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 27

Conread position: 83-241
Cow position: chr5:60715372-60715214 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 32

Conread position: 83-243
Cow position: chr5:24069380-24069545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 150

Conread position: 83-265
Cow position: chr5:63627535-63627349 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 52

Conread position: 83-271
Cow position: chr5:55232822-55232627 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 83-278
Cow position: chr5:55795975-55795771 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 83-287
Cow position: chr5:34915057-34914845 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 7

Conread position: 83-287
Cow position: chr5:50101387-50101169 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 83-287
Cow position: chr5:51065521-51065724 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 130

Conread position: 84-230
Cow position: chr5:4220971-4221122 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 84-312
Cow position: chr5:30247521-30247288 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 24

Conread position: 84-312
Cow position: chr5:39815505-39815263 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 110

Conread position: 85-286
Cow position: chr5:65136262-65136465 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 13

Conread position: 85-287
Cow position: chr5:40241739-40241943 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 103

Conread position: 90-234
Cow position: chr5:43457534-43457384 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 90-242
Cow position: chr5:9369272-9369116 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 90-265
Cow position: chr5:65679973-65679787 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 63

Conread position: 95-279
Cow position: chr5:22643222-22643044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 64

Conread position: 95-287
Cow position: chr5:73168007-73167805 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 96-306
Cow position: chr5:41884930-41885141 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 7

Conread position: 97-258
Cow position: chr5:6683357-6683198 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 46

Conread position: 97-287
Cow position: chr5:38168900-38169101 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 97-292
Cow position: chr5:5855864-5856074 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 98-287
Cow position: chr5:35969540-35969749 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 98-312
Cow position: chr5:57447656-57447427 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 35

Conread position: 99-215
Cow position: chr5:12169760-12169641 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 99-242
Cow position: chr5:44874201-44874347 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 102

Conread position: 99-266
Cow position: chr5:17605126-17604949 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 99-279
Cow position: chr5:64027011-64026815 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 99-279
Cow position: chr5:69636232-69636409 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 130

Conread position: 99-283
Cow position: chr5:74580798-74580992 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 7

Conread position: 99-285
Cow position: chr5:25035246-25035047 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 99-287
Cow position: chr5:50824600-50824792 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 130

Conread position: 99-287
Cow position: chr5:51298704-51298506 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 58

Conread position: 99-287
Cow position: chr5:54425477-54425657 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 102

Conread position: 99-287
Cow position: chr5:56548580-56548775 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 83

Conread position: 99-293
Cow position: chr5:3582568-3582770 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 100-242
Cow position: chr5:45187108-45186967 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 92

Conread position: 101-242
Cow position: chr5:4166652-4166799 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 60

Conread position: 101-304
Cow position: chr5:51125997-51125793 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 132

Conread position: 102-237
Cow position: chr5:35647354-35647493 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 102-237
Cow position: chr5:39258519-39258656 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 49

Conread position: 102-239
Cow position: chr5:57489934-57489797 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 32

Conread position: 102-241
Cow position: chr5:60599193-60599049 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 104

Conread position: 102-286
Cow position: chr5:36142998-36143186 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 41

Conread position: 102-287
Cow position: chr5:60948144-60948341 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 55

Conread position: 102-312
Cow position: chr5:56028528-56028308 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 103-287
Cow position: chr5:74039991-74039797 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 103

Conread position: 103-307
Cow position: chr5:73253423-73253637 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 48

Conread position: 103-309
Cow position: chr5:46704287-46704069 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 104-234
Cow position: chr5:7723678-7723812 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 104-242
Cow position: chr5:51490232-51490092 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 104-286
Cow position: chr5:75228186-75228005 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 122

Conread position: 104-287
Cow position: chr5:2240976-2240780 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 104-287
Cow position: chr5:5016442-5016631 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 39

Conread position: 104-287
Cow position: chr5:20779382-20779190 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 104-287
Cow position: chr5:39035793-39035991 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 97

Conread position: 104-287
Cow position: chr5:52852984-52853176 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 104-287
Cow position: chr5:72045661-72045468 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 54

Conread position: 104-300
Cow position: chr5:57101509-57101304 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 109

Conread position: 104-305
Cow position: chr5:12673460-12673255 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 52

Conread position: 104-312
Cow position: chr5:7012834-7012612 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 31

Conread position: 104-312
Cow position: chr5:51247118-51246895 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 104-312
Cow position: chr5:56467704-56467903 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 79

Conread position: 105-243
Cow position: chr5:4710137-4709996 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 47

Conread position: 105-246
Cow position: chr5:59115400-59115538 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 105-269
Cow position: chr5:21223338-21223500 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 10

Conread position: 105-294
Cow position: chr5:44196915-44196713 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 106-242
Cow position: chr5:55129358-55129498 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 106-287
Cow position: chr5:26147606-26147798 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 106-306
Cow position: chr5:25597848-25598057 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 31

Conread position: 107-304
Cow position: chr5:50943141-50942936 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 109-229
Cow position: chr5:26253155-26253031 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 109-241
Cow position: chr5:5847827-5847692 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 109-285
Cow position: chr5:54312619-54312808 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 109-288
Cow position: chr5:26167440-26167630 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 6

Conread position: 110-242
Cow position: chr5:54436775-54436908 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 110-282
Cow position: chr5:12351788-12351610 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 90

Conread position: 111-237
Cow position: chr5:55849905-55850032 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 23

Conread position: 111-287
Cow position: chr5:35394408-35394230 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 13

Conread position: 111-305
Cow position: chr5:40237231-40237419 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 111

Conread position: 112-312
Cow position: chr5:25495334-25495117 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 113-242
Cow position: chr5:44054031-44053903 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 64

Conread position: 113-311
Cow position: chr5:35190132-35190342 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 114-236
Cow position: chr5:60596108-60595981 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 43

Conread position: 114-287
Cow position: chr5:3817660-3817478 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 114-287
Cow position: chr5:51289568-51289392 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 26

Conread position: 116-242
Cow position: chr5:51490577-51490447 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 117-267
Cow position: chr5:694890-695051 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 34

Conread position: 117-287
Cow position: chr5:34288224-34288045 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 13, 17

Conread position: 117-301
Cow position: chr5:49207297-49207107 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 110, 184

Conread position: 119-307
Cow position: chr5:36822915-36823097 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 24

Conread position: 120-237
Cow position: chr5:23207144-23207026 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 122-234
Cow position: chr5:42623144-42623033 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 122-246
Cow position: chr5:57230303-57230178 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 124-311
Cow position: chr5:16668734-16668926 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 125-242
Cow position: chr5:3677759-3677877 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 32

Conread position: 126-287
Cow position: chr5:22957449-22957612 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 126-311
Cow position: chr5:21721429-21721240 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 6

Conread position: 127-271
Cow position: chr5:70591594-70591739 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 127-283
Cow position: chr5:38647680-38647838 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 142

Conread position: 127-286
Cow position: chr5:38040524-38040360 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 127-287
Cow position: chr5:15991599-15991436 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 112, 78

Conread position: 127-287
Cow position: chr5:37842239-37842070 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 127-298
Cow position: chr5:4864583-4864754 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 79

Conread position: 128-287
Cow position: chr5:6086302-6086132 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 129-234
Cow position: chr5:1946873-1946979 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 129-256
Cow position: chr5:51277811-51277683 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 129-285
Cow position: chr5:51233977-51233817 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 129-286
Cow position: chr5:1694046-1693884 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 129-287
Cow position: chr5:6876926-6876756 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 32

Conread position: 129-287
Cow position: chr5:49821470-49821640 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 129-287
Cow position: chr5:57497382-57497217 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 129-301
Cow position: chr5:6707432-6707257 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 110

Conread position: 129-304
Cow position: chr5:21520396-21520221 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 151, 16

Conread position: 129-306
Cow position: chr5:44734683-44734499 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 129-312
Cow position: chr5:12562718-12562523 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 78

Conread position: 129-312
Cow position: chr5:19079294-19079480 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 58

Conread position: 130-242
Cow position: chr5:60126733-60126845 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 130-260
Cow position: chr5:29979915-29979783 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 130-300
Cow position: chr5:65050166-65049996 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 22

Conread position: 130-307
Cow position: chr5:74887857-74887667 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 131-267
Cow position: chr5:21003358-21003496 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 18

Conread position: 131-287
Cow position: chr5:30561976-30562137 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 131-311
Cow position: chr5:5017420-5017605 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 18

Conread position: 132-287
Cow position: chr5:46479194-46479038 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 20

Conread position: 133-242
Cow position: chr5:4347658-4347549 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 133-312
Cow position: chr5:61580326-61580517 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 156

Conread position: 134-306
Cow position: chr5:41984406-41984572 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 155, 11

Conread position: 138-287
Cow position: chr5:34787625-34787781 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 138-287
Cow position: chr5:42752955-42753105 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 90

Conread position: 141-285
Cow position: chr5:12478901-12478766 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 14

Conread position: 141-287
Cow position: chr5:58401623-58401774 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 17

Conread position: 141-287
Cow position: chr5:65745711-65745559 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 59

Conread position: 141-305
Cow position: chr5:4981504-4981670 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 141

Conread position: 142-235
Cow position: chr5:57785564-57785658 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 142-287
Cow position: chr5:29599491-29599343 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 142-287
Cow position: chr5:29895226-29895380 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 142-287
Cow position: chr5:34918401-34918552 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 142-287
Cow position: chr5:37253484-37253632 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 126
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 142-287
Cow position: chr5:52849140-52849290 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 142-287
Cow position: chr5:60100525-60100671 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 58

Conread position: 142-287
Cow position: chr5:60153830-60153976 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 58

Conread position: 142-287
Cow position: chr5:60207763-60207914 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 142-311
Cow position: chr5:52192374-52192202 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 148

Conread position: 142-312
Cow position: chr5:70572426-70572598 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 22

Conread position: 142-312
Cow position: chr5:74065462-74065285 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 143-242
Cow position: chr5:53175202-53175103 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 143-287
Cow position: chr5:63031317-63031458 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 137, 77

Conread position: 144-267
Cow position: chr5:7558711-7558598 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 145-287
Cow position: chr5:9559479-9559622 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 145-287
Cow position: chr5:52211629-52211482 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 145-287
Cow position: chr5:75478857-75478709 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 146-287
Cow position: chr5:25462147-25462292 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 147-306
Cow position: chr5:66287005-66287168 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 148

Conread position: 149-287
Cow position: chr5:5030505-5030648 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 15

Conread position: 153-285
Cow position: chr5:12504724-12504587 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 156-242
Cow position: chr5:32975827-32975913 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 158-287
Cow position: chr5:31234783-31234913 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 160-287
Cow position: chr5:19626651-19626785 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 160-287
Cow position: chr5:64061092-64061222 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 166-287
Cow position: chr5:4728153-4728278 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 170-312
Cow position: chr5:31964647-31964783 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 45

Show alignments to all cow chromosomes.