Cow genome map
| Conread name: | End1-UMC-pd10en3-010-f05 |
| Conread position: | 1-167 |
| Cow position: | chr19:27833412-27833241 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 1-167 |
| Cow position: | chr19:47321135-47320977 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 1-171 |
| Cow position: | chr19:26017469-26017640 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 1-188 |
| Cow position: | chr19:12124813-12124624 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 1-188 |
| Cow position: | chr19:45590285-45590471 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 1-189 |
| Cow position: | chr19:7581473-7581665 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 1-190 |
| Cow position: | chr19:18628921-18629116 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-316 |
| Cow position: | chr19:54414926-54415249 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 189 |
| Conread position: | 1-365 |
| Cow position: | chr19:10367034-10367384 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 194 |
| Conread position: | 1-373 |
| Cow position: | chr19:2074880-2074502 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 249 |
| Conread position: | 1-375 |
| Cow position: | chr19:19766799-19767178 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 1-377 |
| Cow position: | chr19:19764271-19764640 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 180 |
| Conread position: | 3-167 |
| Cow position: | chr19:13223096-13222932 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 3-228 |
| Cow position: | chr19:43240468-43240240 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 3-375 |
| Cow position: | chr19:13249290-13249665 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 4-178 |
| Cow position: | chr19:8770687-8770863 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 73, 120 |
| Conread position: | 4-254 |
| Cow position: | chr19:51980046-51980290 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-375 |
| Cow position: | chr19:55123474-55123845 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 208 |
| Conread position: | 11-375 |
| Cow position: | chr19:56007346-56007703 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 15-196 |
| Cow position: | chr19:22165844-22166031 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 25-375 |
| Cow position: | chr19:51938520-51938848 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 28-177 |
| Cow position: | chr19:9080325-9080477 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 28-178 |
| Cow position: | chr19:20417629-20417783 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 50-375 |
| Cow position: | chr19:7591746-7592065 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 129 |
| Conread position: | 54-189 |
| Cow position: | chr19:11433933-11433795 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 54-189 |
| Cow position: | chr19:26009717-26009854 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 73-189 |
| Cow position: | chr19:29957957-29957840 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 94-375 |
| Cow position: | chr19:53838023-53837738 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 147 |
| Conread position: | 126-373 |
| Cow position: | chr19:34244882-34245129 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 114 |
| Conread position: | 186-375 |
| Cow position: | chr19:29957864-29957675 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 186-375 |
| Cow position: | chr19:36293615-36293802 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 82 |
| Conread position: | 191-375 |
| Cow position: | chr19:49071816-49071996 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 194-368 |
| Cow position: | chr19:11433811-11433637 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 194-368 |
| Cow position: | chr19:26009838-26010010 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 194-375 |
| Cow position: | chr19:6487886-6487705 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 194-375 |
| Cow position: | chr19:6489280-6489458 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 194-375 |
| Cow position: | chr19:45590455-45590635 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 74 |
Show alignments to all cow chromosomes.