Cow genome map

Conread name: End1-UMC-pd10en3-010-f05

Conread position: 1-136
Cow position: chr22:39503313-39503455 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 1-143
Cow position: chr22:2376905-2377054 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-143
Cow position: chr22:3421107-3420958 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-148
Cow position: chr22:12752781-12752628 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-159
Cow position: chr22:4997993-4997832 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 1-174
Cow position: chr22:23842126-23842301 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 1-178
Cow position: chr22:19971272-19971090 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 1-188
Cow position: chr22:17310682-17310490 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 1-189
Cow position: chr22:2527388-2527200 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 55, 86

Conread position: 1-189
Cow position: chr22:13928774-13928969 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 1-189
Cow position: chr22:18698643-18698450 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 1-189
Cow position: chr22:35531063-35530872 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 128

Conread position: 1-193
Cow position: chr22:1610799-1610988 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 115

Conread position: 1-198
Cow position: chr22:6437902-6438100 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 62

Conread position: 1-369
Cow position: chr22:6702653-6703008 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 66

Conread position: 1-369
Cow position: chr22:19093149-19093509 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 1-374
Cow position: chr22:27747966-27748351 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 1-375
Cow position: chr22:674490-674866 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 240

Conread position: 1-375
Cow position: chr22:2002167-2002562 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 263

Conread position: 2-195
Cow position: chr22:39459196-39459000 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 75, 157

Conread position: 2-267
Cow position: chr22:18993782-18994050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 242

Conread position: 2-375
Cow position: chr22:8121490-8121124 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 210

Conread position: 4-375
Cow position: chr22:8133714-8133353 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 4-375
Cow position: chr22:17926647-17926266 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 183

Conread position: 5-375
Cow position: chr22:10627453-10627809 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 180

Conread position: 11-174
Cow position: chr22:302989-302827 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 26-177
Cow position: chr22:8040857-8040702 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 30

Conread position: 28-178
Cow position: chr22:41501309-41501155 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 28

Conread position: 28-178
Cow position: chr22:41685339-41685185 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 28

Conread position: 28-188
Cow position: chr22:27076799-27076963 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 28

Conread position: 28-188
Cow position: chr22:30911995-30912161 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 34

Conread position: 30-177
Cow position: chr22:31381419-31381267 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 26

Conread position: 48-377
Cow position: chr22:28401381-28401711 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 20

Conread position: 81-347
Cow position: chr22:27389402-27389663 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 129

Conread position: 136-375
Cow position: chr22:17874333-17874586 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 31

Conread position: 168-375
Cow position: chr22:23846315-23846517 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 186-372
Cow position: chr22:6438067-6438250 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 29

Conread position: 191-375
Cow position: chr22:735139-735320 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 24

Conread position: 191-375
Cow position: chr22:2941767-2941587 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 24

Conread position: 191-375
Cow position: chr22:8033467-8033285 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 191-375
Cow position: chr22:8040709-8040528 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 67

Conread position: 191-375
Cow position: chr22:31381274-31381094 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 32

Conread position: 192-375
Cow position: chr22:4997829-4997642 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 61

Conread position: 194-375
Cow position: chr22:302828-302649 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 10

Conread position: 194-375
Cow position: chr22:18695482-18695660 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 19

Conread position: 194-375
Cow position: chr22:30912145-30912326 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 150, 96

Conread position: 194-375
Cow position: chr22:35530888-35530709 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 49

Conread position: 194-375
Cow position: chr22:41501160-41500981 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 194-375
Cow position: chr22:41685190-41685011 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 80

Conread position: 194-377
Cow position: chr22:2527216-2527031 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 53

Show alignments to all cow chromosomes.