Cow genome map
Conread name: | End1-UMC-pd10en3-010-f05 |
Conread position: | 1-136 |
Cow position: | chr22:39503313-39503455 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 116 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 1-143 |
Cow position: | chr22:2376905-2377054 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-143 |
Cow position: | chr22:3421107-3420958 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-148 |
Cow position: | chr22:12752781-12752628 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 1-159 |
Cow position: | chr22:4997993-4997832 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-174 |
Cow position: | chr22:23842126-23842301 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-178 |
Cow position: | chr22:19971272-19971090 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 144 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-188 |
Cow position: | chr22:17310682-17310490 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 154 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-189 |
Cow position: | chr22:2527388-2527200 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 55, 86 |
Conread position: | 1-189 |
Cow position: | chr22:13928774-13928969 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 136 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 1-189 |
Cow position: | chr22:18698643-18698450 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 1-189 |
Cow position: | chr22:35531063-35530872 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 153 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 55, 128 |
Conread position: | 1-193 |
Cow position: | chr22:1610799-1610988 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 44, 115 |
Conread position: | 1-198 |
Cow position: | chr22:6437902-6438100 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 55, 62 |
Conread position: | 1-369 |
Cow position: | chr22:6702653-6703008 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 271 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 44, 66 |
Conread position: | 1-369 |
Cow position: | chr22:19093149-19093509 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 132 |
Conread position: | 1-374 |
Cow position: | chr22:27747966-27748351 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 19 |
Conread position: | 1-375 |
Cow position: | chr22:674490-674866 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 240 |
Conread position: | 1-375 |
Cow position: | chr22:2002167-2002562 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 263 |
Conread position: | 2-195 |
Cow position: | chr22:39459196-39459000 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 155 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 75, 157 |
Conread position: | 2-267 |
Cow position: | chr22:18993782-18994050 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 242 |
Conread position: | 2-375 |
Cow position: | chr22:8121490-8121124 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 210 |
Conread position: | 4-375 |
Cow position: | chr22:8133714-8133353 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 207 |
Conread position: | 4-375 |
Cow position: | chr22:17926647-17926266 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 183 |
Conread position: | 5-375 |
Cow position: | chr22:10627453-10627809 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 269 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 51, 180 |
Conread position: | 11-174 |
Cow position: | chr22:302989-302827 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 26-177 |
Cow position: | chr22:8040857-8040702 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 28-178 |
Cow position: | chr22:41501309-41501155 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-178 |
Cow position: | chr22:41685339-41685185 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-188 |
Cow position: | chr22:27076799-27076963 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 119 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-188 |
Cow position: | chr22:30911995-30912161 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 17, 34 |
Conread position: | 30-177 |
Cow position: | chr22:31381419-31381267 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 15, 26 |
Conread position: | 48-377 |
Cow position: | chr22:28401381-28401711 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 20 |
Conread position: | 81-347 |
Cow position: | chr22:27389402-27389663 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 186 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 30, 129 |
Conread position: | 136-375 |
Cow position: | chr22:17874333-17874586 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 179 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 168-375 |
Cow position: | chr22:23846315-23846517 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 186-372 |
Cow position: | chr22:6438067-6438250 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 148 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 93, 29 |
Conread position: | 191-375 |
Cow position: | chr22:735139-735320 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 87, 24 |
Conread position: | 191-375 |
Cow position: | chr22:2941767-2941587 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 102, 24 |
Conread position: | 191-375 |
Cow position: | chr22:8033467-8033285 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 191-375 |
Cow position: | chr22:8040709-8040528 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 105, 67 |
Conread position: | 191-375 |
Cow position: | chr22:31381274-31381094 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 105, 32 |
Conread position: | 192-375 |
Cow position: | chr22:4997829-4997642 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 26, 61 |
Conread position: | 194-375 |
Cow position: | chr22:302828-302649 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 15, 10 |
Conread position: | 194-375 |
Cow position: | chr22:18695482-18695660 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 86, 19 |
Conread position: | 194-375 |
Cow position: | chr22:30912145-30912326 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 127 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 150, 96 |
Conread position: | 194-375 |
Cow position: | chr22:35530888-35530709 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 137 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 194-375 |
Cow position: | chr22:41501160-41500981 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 127 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 194-375 |
Cow position: | chr22:41685190-41685011 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 93, 80 |
Conread position: | 194-377 |
Cow position: | chr22:2527216-2527031 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 26, 53 |
Show alignments to all cow chromosomes.