Cow genome map
| Conread name: | End1-UMC-pd10en3-010-f05 |
| Conread position: | 1-143 |
| Cow position: | chr23:26270356-26270207 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-150 |
| Cow position: | chr23:19636836-19636990 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-167 |
| Cow position: | chr23:2537535-2537367 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 1-167 |
| Cow position: | chr23:9727593-9727765 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-189 |
| Cow position: | chr23:19676730-19676542 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 109, 172 |
| Conread position: | 1-189 |
| Cow position: | chr23:22874096-22874284 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 110, 72 |
| Conread position: | 1-189 |
| Cow position: | chr23:26203823-26203642 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 1-189 |
| Cow position: | chr23:40912558-40912744 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 1-368 |
| Cow position: | chr23:4829053-4829429 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 290 |
| Conread position: | 1-372 |
| Cow position: | chr23:41374962-41375328 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 242 |
| Conread position: | 1-375 |
| Cow position: | chr23:4548009-4547637 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 1-375 |
| Cow position: | chr23:14495609-14495252 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 143 |
| Conread position: | 5-375 |
| Cow position: | chr23:37664198-37664573 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 180 |
| Conread position: | 6-372 |
| Cow position: | chr23:13097266-13097636 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 6-375 |
| Cow position: | chr23:10542730-10542358 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 180 |
| Conread position: | 14-189 |
| Cow position: | chr23:37975036-37975204 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 27-188 |
| Cow position: | chr23:20767533-20767368 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 54-375 |
| Cow position: | chr23:37712948-37712642 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 55-375 |
| Cow position: | chr23:39714085-39713769 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 121 |
| Conread position: | 72-189 |
| Cow position: | chr23:5713223-5713106 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-372 |
| Cow position: | chr23:37975180-37975366 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 191-375 |
| Cow position: | chr23:38704957-38705139 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 194-362 |
| Cow position: | chr23:23016579-23016415 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 194-375 |
| Cow position: | chr23:18858850-18859029 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 194-375 |
| Cow position: | chr23:20767384-20767207 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 194-375 |
| Cow position: | chr23:33619296-33619113 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 194-376 |
| Cow position: | chr23:23042536-23042358 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 194-376 |
| Cow position: | chr23:23088046-23087866 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 21 |
Show alignments to all cow chromosomes.