Cow genome map
| Conread name: | End1-UMC-pd10en3-010-f05 |
| Conread position: | 1-137 |
| Cow position: | chr26:20978130-20978271 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-150 |
| Cow position: | chr26:11054345-11054201 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 1-159 |
| Cow position: | chr26:12886251-12886418 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-170 |
| Cow position: | chr26:34782345-34782518 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 1-189 |
| Cow position: | chr26:7062261-7062069 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-189 |
| Cow position: | chr26:11823533-11823726 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 159 |
| Conread position: | 1-189 |
| Cow position: | chr26:18490873-18490680 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 1-189 |
| Cow position: | chr26:18508212-18508019 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 1-189 |
| Cow position: | chr26:28458850-28459042 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 1-196 |
| Cow position: | chr26:10990340-10990538 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 1-198 |
| Cow position: | chr26:6605087-6604904 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-281 |
| Cow position: | chr26:2921597-2921301 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 200 |
| Conread position: | 1-375 |
| Cow position: | chr26:11989340-11988961 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 252 |
| Conread position: | 1-375 |
| Cow position: | chr26:18847794-18847422 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 1-375 |
| Cow position: | chr26:24954719-24954351 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 201 |
| Conread position: | 2-177 |
| Cow position: | chr26:31954206-31954380 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 3-375 |
| Cow position: | chr26:29776028-29776396 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 198 |
| Conread position: | 4-368 |
| Cow position: | chr26:12264146-12264503 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 40 |
| Conread position: | 26-177 |
| Cow position: | chr26:26674111-26673957 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 27-178 |
| Cow position: | chr26:35105705-35105553 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 28-177 |
| Cow position: | chr26:6530043-6530196 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 28-177 |
| Cow position: | chr26:13743387-13743538 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 28-177 |
| Cow position: | chr26:19761715-19761562 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 28-177 |
| Cow position: | chr26:34993150-34993299 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 28-188 |
| Cow position: | chr26:1542663-1542499 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 49-188 |
| Cow position: | chr26:19167631-19167770 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-251 |
| Cow position: | chr26:15627222-15627423 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 191 |
| Conread position: | 53-375 |
| Cow position: | chr26:34857574-34857885 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 70-189 |
| Cow position: | chr26:12220654-12220774 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 171-375 |
| Cow position: | chr26:29764633-29764835 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 186-375 |
| Cow position: | chr26:12220750-12220936 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 191-375 |
| Cow position: | chr26:1542517-1542335 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 191-375 |
| Cow position: | chr26:6530189-6530370 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 191-375 |
| Cow position: | chr26:13743531-13743713 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 194-372 |
| Cow position: | chr26:375911-375736 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 194-375 |
| Cow position: | chr26:6604929-6604752 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 194-375 |
| Cow position: | chr26:19761566-19761388 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 194-375 |
| Cow position: | chr26:27157015-27157194 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 195-375 |
| Cow position: | chr26:18490695-18490521 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 195-375 |
| Cow position: | chr26:18508034-18507860 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 225-375 |
| Cow position: | chr26:6663286-6663139 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.