Cow genome map
Conread name: | End1-UMC-pd10en3-010-f05 |
Conread position: | 1-138 |
Cow position: | chr4:64369705-64369570 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 73 |
Conread position: | 1-145 |
Cow position: | chr4:28223867-28224014 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-163 |
Cow position: | chr4:65944645-65944480 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 133 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-167 |
Cow position: | chr4:5228884-5228713 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 1-167 |
Cow position: | chr4:12226695-12226863 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-167 |
Cow position: | chr4:14528460-14528288 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-167 |
Cow position: | chr4:48235973-48236144 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-184 |
Cow position: | chr4:29905717-29905540 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 129 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1-188 |
Cow position: | chr4:57725768-57725583 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 82, 24 |
Conread position: | 1-189 |
Cow position: | chr4:11169101-11169294 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 56, 115 |
Conread position: | 1-189 |
Cow position: | chr4:13150370-13150561 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-189 |
Cow position: | chr4:28285872-28286068 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 79, 43 |
Conread position: | 1-189 |
Cow position: | chr4:43420771-43420579 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 156 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 70, 30 |
Conread position: | 1-189 |
Cow position: | chr4:44085990-44086182 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 151 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 1-189 |
Cow position: | chr4:57717235-57717049 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 44, 23 |
Conread position: | 1-193 |
Cow position: | chr4:3463810-3464007 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 150 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-193 |
Cow position: | chr4:45451374-45451557 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 149 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 100, 23 |
Conread position: | 1-202 |
Cow position: | chr4:32024776-32024575 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 44, 118 |
Conread position: | 1-364 |
Cow position: | chr4:63394151-63393805 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 79 |
Conread position: | 1-364 |
Cow position: | chr4:63398748-63398399 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 79 |
Conread position: | 1-375 |
Cow position: | chr4:42980957-42981334 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 206 |
Conread position: | 1-375 |
Cow position: | chr4:66835750-66836127 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 167 |
Conread position: | 1-375 |
Cow position: | chr4:67567985-67568331 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 23 |
Conread position: | 1-377 |
Cow position: | chr4:18006276-18005892 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 55 |
Conread position: | 2-150 |
Cow position: | chr4:12652233-12652079 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 2-169 |
Cow position: | chr4:14576314-14576149 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 78, 22 |
Conread position: | 3-193 |
Cow position: | chr4:59531620-59531815 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-369 |
Cow position: | chr4:14480342-14479983 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 145 |
Conread position: | 3-375 |
Cow position: | chr4:61152090-61152465 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 212 |
Conread position: | 4-189 |
Cow position: | chr4:44621696-44621885 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 52, 124 |
Conread position: | 4-212 |
Cow position: | chr4:42485369-42485574 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 4-218 |
Cow position: | chr4:3868617-3868833 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 166 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 73, 102 |
Conread position: | 4-360 |
Cow position: | chr4:58431800-58431439 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 48 |
Conread position: | 4-375 |
Cow position: | chr4:43465758-43465391 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 93 |
Conread position: | 4-377 |
Cow position: | chr4:54142104-54141736 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 40 |
Conread position: | 6-193 |
Cow position: | chr4:12701911-12702098 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 174, 45 |
Conread position: | 12-375 |
Cow position: | chr4:38925538-38925906 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 172 |
Conread position: | 18-177 |
Cow position: | chr4:41123345-41123183 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 18-178 |
Cow position: | chr4:10980267-10980102 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 35, 82 |
Conread position: | 28-162 |
Cow position: | chr4:7983390-7983523 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 28-174 |
Cow position: | chr4:47132487-47132637 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-177 |
Cow position: | chr4:7160627-7160474 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 28-177 |
Cow position: | chr4:23122595-23122442 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-177 |
Cow position: | chr4:67562698-67562545 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 28-189 |
Cow position: | chr4:60094035-60093870 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 38-163 |
Cow position: | chr4:44754006-44753875 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 38-178 |
Cow position: | chr4:64673627-64673483 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 94-189 |
Cow position: | chr4:36494297-36494202 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 80 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 128-373 |
Cow position: | chr4:10419252-10419013 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 181-376 |
Cow position: | chr4:41123200-41123007 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 124, 77 |
Conread position: | 183-368 |
Cow position: | chr4:52325811-52325624 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 109, 58 |
Conread position: | 184-375 |
Cow position: | chr4:45451526-45451714 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 38, 60 |
Conread position: | 186-365 |
Cow position: | chr4:36494226-36494048 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 56 |
Conread position: | 186-375 |
Cow position: | chr4:63586179-63585991 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 134 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 62, 84 |
Conread position: | 187-375 |
Cow position: | chr4:12702070-12702257 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 191-375 |
Cow position: | chr4:23122449-23122267 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 16, 25 |
Conread position: | 191-375 |
Cow position: | chr4:47132633-47132815 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 105, 67 |
Conread position: | 193-377 |
Cow position: | chr4:14576146-14575967 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 133 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 13, 23 |
Conread position: | 194-361 |
Cow position: | chr4:29905551-29905388 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 194-362 |
Cow position: | chr4:43420595-43420430 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 138 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 194-373 |
Cow position: | chr4:44086166-44086338 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 138 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 157, 48 |
Conread position: | 194-375 |
Cow position: | chr4:13150545-13150721 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 74, 48 |
Conread position: | 194-375 |
Cow position: | chr4:31596618-31596439 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 125 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 194-375 |
Cow position: | chr4:44621869-44622040 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 194-375 |
Cow position: | chr4:57725599-57725421 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 112, 47 |
Conread position: | 194-375 |
Cow position: | chr4:64152715-64152894 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 102, 74 |
Conread position: | 194-376 |
Cow position: | chr4:60093886-60093709 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 195-375 |
Cow position: | chr4:14424109-14423929 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 127 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 42, 79 |
Conread position: | 196-375 |
Cow position: | chr4:7983529-7983706 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 82, 64 |
Conread position: | 201-375 |
Cow position: | chr4:65944464-65944293 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 224-375 |
Cow position: | chr4:48236220-48236367 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 81, 17 |
Show alignments to all cow chromosomes.