Cow genome map
Conread name: | End1-UMC-pd10en3-010-f05 |
Conread position: | 1-143 |
Cow position: | chr6:56909865-56910012 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-173 |
Cow position: | chr6:15068899-15068730 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 79, 23 |
Conread position: | 1-178 |
Cow position: | chr6:37390384-37390210 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 77, 32 |
Conread position: | 1-178 |
Cow position: | chr6:50481688-50481862 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 79, 25 |
Conread position: | 1-188 |
Cow position: | chr6:50743057-50743243 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 179, 37 |
Conread position: | 1-188 |
Cow position: | chr6:61436322-61436137 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 85, 43 |
Conread position: | 1-188 |
Cow position: | chr6:67782120-67782311 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 144 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 27, 138 |
Conread position: | 1-189 |
Cow position: | chr6:5984432-5984233 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 76, 158 |
Conread position: | 1-189 |
Cow position: | chr6:26451369-26451183 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 149 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 53, 161 |
Conread position: | 1-189 |
Cow position: | chr6:47228925-47228734 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 76, 98 |
Conread position: | 1-189 |
Cow position: | chr6:50266049-50265857 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 1-189 |
Cow position: | chr6:54338062-54337873 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 49, 28 |
Conread position: | 1-189 |
Cow position: | chr6:60795050-60794858 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 149 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 51, 121 |
Conread position: | 1-190 |
Cow position: | chr6:26242523-26242330 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 65, 146 |
Conread position: | 1-362 |
Cow position: | chr6:38939639-38940001 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 7 |
Conread position: | 1-362 |
Cow position: | chr6:44496279-44495936 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 24 |
Conread position: | 1-362 |
Cow position: | chr6:47225985-47226349 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 59 |
Conread position: | 1-365 |
Cow position: | chr6:37884598-37884967 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 246 |
Conread position: | 1-374 |
Cow position: | chr6:49801308-49801683 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 184 |
Conread position: | 2-266 |
Cow position: | chr6:53233804-53233560 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 43, 20 |
Conread position: | 2-373 |
Cow position: | chr6:62993960-62994330 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 145 |
Conread position: | 4-342 |
Cow position: | chr6:24803856-24803514 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 48 |
Conread position: | 4-375 |
Cow position: | chr6:42804064-42804413 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 265 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 76, 135 |
Conread position: | 6-188 |
Cow position: | chr6:48151625-48151447 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 6-365 |
Cow position: | chr6:16604450-16604813 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 177 |
Conread position: | 8-375 |
Cow position: | chr6:62860262-62859893 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 47 |
Conread position: | 10-223 |
Cow position: | chr6:44231270-44231053 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 157 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 42, 22 |
Conread position: | 25-188 |
Cow position: | chr6:28433914-28433751 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 155, 5 |
Conread position: | 28-188 |
Cow position: | chr6:14883473-14883309 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 28-188 |
Cow position: | chr6:61542740-61542575 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 29-177 |
Cow position: | chr6:59297950-59297800 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 16, 27 |
Conread position: | 38-178 |
Cow position: | chr6:1632307-1632450 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 7, 18 |
Conread position: | 44-174 |
Cow position: | chr6:5717056-5717185 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 89-375 |
Cow position: | chr6:4017633-4017348 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 198 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 12, 154 |
Conread position: | 164-375 |
Cow position: | chr6:61542619-61542414 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 145 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 186-375 |
Cow position: | chr6:56911159-56911349 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 101, 17 |
Conread position: | 191-360 |
Cow position: | chr6:37390218-37390051 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 76, 51 |
Conread position: | 191-362 |
Cow position: | chr6:26451202-26451036 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 191-375 |
Cow position: | chr6:27734256-27734076 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 191-375 |
Cow position: | chr6:50743224-50743409 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 90, 50 |
Conread position: | 194-375 |
Cow position: | chr6:5717184-5717368 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 72, 90 |
Conread position: | 194-375 |
Cow position: | chr6:50265873-50265697 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 72, 45 |
Conread position: | 194-375 |
Cow position: | chr6:55960958-55961137 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 160, 65 |
Conread position: | 194-375 |
Cow position: | chr6:60794874-60794695 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 143 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 194-377 |
Cow position: | chr6:50481857-50482037 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 86, 47 |
Conread position: | 195-377 |
Cow position: | chr6:46552786-46552607 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 92, 37 |
Conread position: | 197-375 |
Cow position: | chr6:61436150-61435978 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 198-375 |
Cow position: | chr6:11177296-11177470 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 125 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 69, 44 |
Show alignments to all cow chromosomes.