Cow genome map

Conread name: End1-UMC-pd10en3-010-f05

Conread position: 1-143
Cow position: chr6:56909865-56910012 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-173
Cow position: chr6:15068899-15068730 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 23

Conread position: 1-178
Cow position: chr6:37390384-37390210 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 32

Conread position: 1-178
Cow position: chr6:50481688-50481862 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 25

Conread position: 1-188
Cow position: chr6:50743057-50743243 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 179, 37

Conread position: 1-188
Cow position: chr6:61436322-61436137 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 43

Conread position: 1-188
Cow position: chr6:67782120-67782311 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 138

Conread position: 1-189
Cow position: chr6:5984432-5984233 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 158

Conread position: 1-189
Cow position: chr6:26451369-26451183 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 53, 161

Conread position: 1-189
Cow position: chr6:47228925-47228734 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 98

Conread position: 1-189
Cow position: chr6:50266049-50265857 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 1-189
Cow position: chr6:54338062-54337873 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 28

Conread position: 1-189
Cow position: chr6:60795050-60794858 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 121

Conread position: 1-190
Cow position: chr6:26242523-26242330 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 146

Conread position: 1-362
Cow position: chr6:38939639-38940001 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 7

Conread position: 1-362
Cow position: chr6:44496279-44495936 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 1-362
Cow position: chr6:47225985-47226349 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 59

Conread position: 1-365
Cow position: chr6:37884598-37884967 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 1-374
Cow position: chr6:49801308-49801683 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 2-266
Cow position: chr6:53233804-53233560 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 20

Conread position: 2-373
Cow position: chr6:62993960-62994330 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 145

Conread position: 4-342
Cow position: chr6:24803856-24803514 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 48

Conread position: 4-375
Cow position: chr6:42804064-42804413 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 135

Conread position: 6-188
Cow position: chr6:48151625-48151447 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 18

Conread position: 6-365
Cow position: chr6:16604450-16604813 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 177

Conread position: 8-375
Cow position: chr6:62860262-62859893 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 47

Conread position: 10-223
Cow position: chr6:44231270-44231053 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 22

Conread position: 25-188
Cow position: chr6:28433914-28433751 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 5

Conread position: 28-188
Cow position: chr6:14883473-14883309 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 29

Conread position: 28-188
Cow position: chr6:61542740-61542575 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 28

Conread position: 29-177
Cow position: chr6:59297950-59297800 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 27

Conread position: 38-178
Cow position: chr6:1632307-1632450 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 18

Conread position: 44-174
Cow position: chr6:5717056-5717185 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 89-375
Cow position: chr6:4017633-4017348 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 154

Conread position: 164-375
Cow position: chr6:61542619-61542414 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 186-375
Cow position: chr6:56911159-56911349 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 17

Conread position: 191-360
Cow position: chr6:37390218-37390051 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 51

Conread position: 191-362
Cow position: chr6:26451202-26451036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 191-375
Cow position: chr6:27734256-27734076 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 191-375
Cow position: chr6:50743224-50743409 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 50

Conread position: 194-375
Cow position: chr6:5717184-5717368 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 90

Conread position: 194-375
Cow position: chr6:50265873-50265697 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 45

Conread position: 194-375
Cow position: chr6:55960958-55961137 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 65

Conread position: 194-375
Cow position: chr6:60794874-60794695 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 194-377
Cow position: chr6:50481857-50482037 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 47

Conread position: 195-377
Cow position: chr6:46552786-46552607 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 37

Conread position: 197-375
Cow position: chr6:61436150-61435978 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 198-375
Cow position: chr6:11177296-11177470 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 44

Show alignments to all cow chromosomes.