Cow genome map

Conread name: End1-UMC-pd10en3-010-f05

Conread position: 1-147
Cow position: chrX:26463813-26463660 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-147
Cow position: chrX:30035838-30035993 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-167
Cow position: chrX:12649275-12649103 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1-167
Cow position: chrX:42467280-42467450 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1-167
Cow position: chrX:42570504-42570666 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 38

Conread position: 1-178
Cow position: chrX:39861193-39861018 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 124, 0

Conread position: 1-189
Cow position: chrX:25306572-25306762 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 1-189
Cow position: chrX:32978736-32978930 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position: chrX:37074854-37075039 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 1-189
Cow position: chrX:39528619-39528431 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 157

Conread position: 1-189
Cow position: chrX:44117100-44117292 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 29

Conread position: 1-212
Cow position: chrX:47336132-47336347 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 40

Conread position: 1-278
Cow position: chrX:47331541-47331822 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 55, 38

Conread position: 1-327
Cow position: chrX:48264980-48265301 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 82, 31

Conread position: 1-362
Cow position: chrX:48015908-48016271 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 1-375
Cow position: chrX:28641804-28641441 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 1-375
Cow position: chrX:45769540-45769911 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 38

Conread position: 1-375
Cow position: chrX:48401288-48401656 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 38

Conread position: 2-146
Cow position: chrX:15267140-15267291 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 2-196
Cow position: chrX:34827445-34827249 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 9

Conread position: 3-163
Cow position: chrX:29919684-29919850 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 3-372
Cow position: chrX:45893159-45892807 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 36

Conread position: 4-375
Cow position: chrX:36090608-36090234 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 183

Conread position: 7-189
Cow position: chrX:19503546-19503362 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 23

Conread position: 25-368
Cow position: chrX:31204055-31203716 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 5

Conread position: 28-177
Cow position: chrX:26381411-26381560 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 28

Conread position: 28-177
Cow position: chrX:42417031-42416878 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 28

Conread position: 28-188
Cow position: chrX:42497012-42496851 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 28

Conread position: 33-177
Cow position: chrX:6393019-6393163 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 46

Conread position: 186-375
Cow position: chrX:48665042-48664855 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 191-375
Cow position: chrX:26381553-26381737 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 67

Conread position: 194-373
Cow position: chrX:25306746-25306919 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 194-375
Cow position: chrX:29144926-29145105 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 64

Conread position: 194-375
Cow position: chrX:32978914-32979096 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 48

Conread position: 194-375
Cow position: chrX:42496867-42496688 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 47

Conread position: 214-369
Cow position: chrX:39983408-39983255 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 44

Conread position: 223-364
Cow position: chrX:47336397-47336539 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 18

Conread position: 223-373
Cow position: chrX:47943666-47943517 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 45

Show alignments to all cow chromosomes.