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Cow genome map

           
Conread name:
           
End1-UMC-pd10en3-022-e09
        

               
Conread position:
               
28-349
               

               
Cow position:
               
chr17:24587351-24587685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 278
               

               
Conread position:
               
31-349
               

               
Cow position:
               
chr17:36790885-36791197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
33-347
               

               
Cow position:
               
chr17:20157355-20157666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 133
               

               
Conread position:
               
33-349
               

               
Cow position:
               
chr17:15333971-15333649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
35-349
               

               
Cow position:
               
chr17:9777991-9778304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr17:24787277-24786963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 187
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr17:6624008-6624317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr17:32651366-32651593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
48-349
               

               
Cow position:
               
chr17:24761470-24761167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 57
               

               
Conread position:
               
49-269
               

               
Cow position:
               
chr17:33403186-33402964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr17:17405893-17406196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
51-349
               

               
Cow position:
               
chr17:6423517-6423825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr17:21313044-21312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
53-269
               

               
Cow position:
               
chr17:30999534-30999745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr17:8690678-8690380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr17:5767678-5767968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
63-319
               

               
Cow position:
               
chr17:27819070-27819323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr17:9746289-9746576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
209, 42
               

               
Conread position:
               
65-272
               

               
Cow position:
               
chr17:2079531-2079736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
65-342
               

               
Cow position:
               
chr17:5246666-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr17:25168085-25168291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr17:5896138-5895937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr17:43717534-43717267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
67-349
               

               
Cow position:
               
chr17:40771602-40771897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr17:37163755-37163468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 220
               

               
Conread position:
               
68-272
               

               
Cow position:
               
chr17:26182995-26183198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
68-332
               

               
Cow position:
               
chr17:3387067-3387317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr17:33792955-33793224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
68-348
               

               
Cow position:
               
chr17:21115175-21114894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
68-349
               

               
Cow position:
               
chr17:3781818-3782108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
68-349
               

               
Cow position:
               
chr17:32993840-32993563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
69-265
               

               
Cow position:
               
chr17:9565083-9565278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr17:18720674-18720477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr17:20083738-20083541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr17:27795422-27795619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr17:1295797-1295596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr17:5224177-5224374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr17:38832816-38833016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr17:18490307-18490513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr17:21031562-21031758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
157, 36
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr17:23063485-23063690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr17:25189054-25189263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr17:38614730-38614934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
69-346
               

               
Cow position:
               
chr17:28285252-28284970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
69-347
               

               
Cow position:
               
chr17:39735960-39736235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
69-348
               

               
Cow position:
               
chr17:21959905-21959628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
69-348
               

               
Cow position:
               
chr17:29715412-29715138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr17:11664814-11664524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr17:22032909-22032637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr17:24883790-24883510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr17:25900975-25901261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr17:15664443-15664740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr17:29292595-29292317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr17:33288880-33288594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
70-259
               

               
Cow position:
               
chr17:16117654-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr17:4606745-4606930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
70-269
               

               
Cow position:
               
chr17:21004056-21003856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr17:1061287-1061086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr17:27305936-27306132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
70-272
               

               
Cow position:
               
chr17:21874541-21874331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr17:41029727-41029997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr17:32138625-32138364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
70-349
               

               
Cow position:
               
chr17:23101436-23101158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
70-349
               

               
Cow position:
               
chr17:24973725-24974002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
70-350
               

               
Cow position:
               
chr17:17059215-17059486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr17:1783831-1783541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
71-349
               

               
Cow position:
               
chr17:31231339-31231055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
73-349
               

               
Cow position:
               
chr17:13922251-13922542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 241
               

               
Conread position:
               
75-268
               

               
Cow position:
               
chr17:10649629-10649817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr17:33271899-33271710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
75-270
               

               
Cow position:
               
chr17:7132675-7132477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
75-270
               

               
Cow position:
               
chr17:11056595-11056397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
75-347
               

               
Cow position:
               
chr17:12059310-12059033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
75-347
               

               
Cow position:
               
chr17:14848743-14848482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr17:13244246-13243984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr17:20126401-20126662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
210, 34
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr17:21293265-21292981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr17:25128568-25128292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
77-251
               

               
Cow position:
               
chr17:36533443-36533611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
77-261
               

               
Cow position:
               
chr17:43527763-43527942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
77-270
               

               
Cow position:
               
chr17:27667412-27667215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr17:7041163-7040970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr17:26230722-26230926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr17:31481260-31481004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
77-346
               

               
Cow position:
               
chr17:5733666-5733410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
77-346
               

               
Cow position:
               
chr17:16371034-16371314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
77-346
               

               
Cow position:
               
chr17:27142538-27142803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
77-346
               

               
Cow position:
               
chr17:40421451-40421729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:3471203-3471480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:5423289-5423008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:11102012-11101742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:17222126-17222401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 91
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:20835375-20835642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 199
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:20839776-20839505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:20848313-20848584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr17:32419336-32419055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 211
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr17:29472257-29472529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
78-349
               

               
Cow position:
               
chr17:24553787-24554057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
79-270
               

               
Cow position:
               
chr17:8544094-8544281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
81-351
               

               
Cow position:
               
chr17:4225705-4225436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
83-270
               

               
Cow position:
               
chr17:21755653-21755456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr17:24077193-24077372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:1275308-1275498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:3182795-3182611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:3498875-3498690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:11296424-11296613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:24580510-24580323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:25078204-25078028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:28539825-28540003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr17:32027673-32027482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr17:25097252-25097508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
84-343
               

               
Cow position:
               
chr17:20780301-20780564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
188, 114
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr17:9697917-9697641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr17:18109297-18109021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
85-272
               

               
Cow position:
               
chr17:22781482-22781667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
85-351
               

               
Cow position:
               
chr17:27765071-27765335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr17:21335907-21335629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
87-332
               

               
Cow position:
               
chr17:33052655-33052890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr17:32279114-32278933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr17:13143897-13143717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
88-344
               

               
Cow position:
               
chr17:20993246-20992981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
88-347
               

               
Cow position:
               
chr17:21323093-21323335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr17:38646861-38647122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr17:11156699-11156516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
89-272
               

               
Cow position:
               
chr17:11618374-11618561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
89-272
               

               
Cow position:
               
chr17:30665067-30665247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr17:9117437-9117623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr17:4601752-4601485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
183, 213
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr17:18860926-18860660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr17:23246006-23246269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr17:27429372-27429640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 150
               

               
Conread position:
               
89-351
               

               
Cow position:
               
chr17:34079304-34079048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
90-349
               

               
Cow position:
               
chr17:24549967-24550238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
92-270
               

               
Cow position:
               
chr17:42347424-42347252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr17:33291013-33290749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
93-269
               

               
Cow position:
               
chr17:37480193-37480019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
96-349
               

               
Cow position:
               
chr17:21243984-21243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 208
               

               
Conread position:
               
97-269
               

               
Cow position:
               
chr17:3518448-3518280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
97-349
               

               
Cow position:
               
chr17:9911566-9911821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
98-271
               

               
Cow position:
               
chr17:10528936-10528760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
98-272
               

               
Cow position:
               
chr17:21412442-21412270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
98-327
               

               
Cow position:
               
chr17:24490326-24490562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 224
               

               
Conread position:
               
98-351
               

               
Cow position:
               
chr17:21434924-21434664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
176, 129
               

               
Conread position:
               
99-267
               

               
Cow position:
               
chr17:7648026-7648183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 91
               

               
Conread position:
               
99-269
               

               
Cow position:
               
chr17:32950078-32950246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
99-272
               

               
Cow position:
               
chr17:25999922-26000092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 90
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr17:1035795-1035556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:11216077-11215827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:12447592-12447340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:18495704-18495456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
158, 44
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:21207329-21207080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:24824058-24824303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
99-350
               

               
Cow position:
               
chr17:3503391-3503645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
100-272
               

               
Cow position:
               
chr17:37857927-37857748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
101-270
               

               
Cow position:
               
chr17:4436423-4436259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr17:24773492-24773752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
103-265
               

               
Cow position:
               
chr17:33926316-33926156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
103-349
               

               
Cow position:
               
chr17:12536658-12536404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
165, 74
               

               
Conread position:
               
104-349
               

               
Cow position:
               
chr17:34208009-34207754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
170, 87
               

               
Conread position:
               
105-349
               

               
Cow position:
               
chr17:908558-908801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 72
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr17:3442851-3442642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr17:3577358-3577594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
156, 185
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr17:29157238-29157479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
116-273
               

               
Cow position:
               
chr17:24149000-24149160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
116-349
               

               
Cow position:
               
chr17:32273861-32273626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
118-343
               

               
Cow position:
               
chr17:10459111-10458881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
167, 55
               

               
Conread position:
               
118-349
               

               
Cow position:
               
chr17:12590988-12591230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 186
               

               
Conread position:
               
119-349
               

               
Cow position:
               
chr17:3467595-3467813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
121-349
               

               
Cow position:
               
chr17:1634654-1634431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
122-349
               

               
Cow position:
               
chr17:15340908-15340693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
122-351
               

               
Cow position:
               
chr17:5398606-5398379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
104, 5
               

               
Conread position:
               
125-330
               

               
Cow position:
               
chr17:21918042-21917837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr17:10510828-10510596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
145, 167
               

               
Conread position:
               
128-270
               

               
Cow position:
               
chr17:979318-979182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr17:4106150-4105935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr17:4121886-4121671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr17:27058715-27058579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr17:1562936-1562720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
182, 66
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr17:7142702-7142922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr17:28467977-28468189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
135-270
               

               
Cow position:
               
chr17:40792065-40792196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
136-272
               

               
Cow position:
               
chr17:18146025-18146160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr17:4967956-4968173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 118
               

               
Conread position:
               
139-351
               

               
Cow position:
               
chr17:31037534-31037314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
142-351
               

               
Cow position:
               
chr17:31701286-31701494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
145-270
               

               
Cow position:
               
chr17:20928762-20928888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
145-272
               

               
Cow position:
               
chr17:14003669-14003793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
146-351
               

               
Cow position:
               
chr17:6328961-6329178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr17:30728382-30728563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
162-327
               

               
Cow position:
               
chr17:40673251-40673409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
165-333
               

               
Cow position:
               
chr17:6848674-6848842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
167-272
               

               
Cow position:
               
chr17:14060906-14060799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr17:4300041-4299874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
182-349
               

               
Cow position:
               
chr17:23563904-23563735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
195-349
               

               
Cow position:
               
chr17:21325231-21325393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
195-349
               

               
Cow position:
               
chr17:25616157-25616311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
198-346
               

               
Cow position:
               
chr17:11912596-11912445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
202-346
               

               
Cow position:
               
chr17:23517037-23516884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               
Show alignments to all cow chromosomes.